Quillaja saponaria (soapbark tree): O6P43_010788
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Entry
O6P43_010788 CDS
T09778
Name
(GenBank) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_010788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_010788
Spliceosome [BR:
qsa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
O6P43_010788
Complex B
O6P43_010788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_YTH1
xRRM
RBD_AKAP-17A
DUF1866
Motif
Other DBs
NCBI-ProteinID:
KAJ7972977
UniProt:
A0AAD7Q164
LinkDB
All DBs
Position
4:complement(30529768..30534250)
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AA seq
244 aa
AA seq
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MGDVNPGSDVPSNMTIYINNLNEKIKLEELKKSLYAVFSQFGKIMEVLAFKTLKHKGQAW
VVFEDVSSATNAIRQMQGFPFYDKPMRIQFAKTKSDIIAKADGTFVPREKRKRHDDKGKK
RKDQHDANQAGMGLNPPYGGAYGTAPPLSQIPYPGGAKAMVPEAPAPPNNILFIQNLPNE
TASMMLQMLFLQYPGFKEVRMVETKPGIAFVEYENEIQSTAAMQALQGFKITPQNPMVIT
YAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgttaatcctggcagtgatgtcccttcaaatatgaccatatacatcaacaac
cttaacgagaaaatcaagcttgaagagttgaagaagtcgttgtacgccgtgttctcgcag
ttcgggaagataatggaggtgttggctttcaagacgctgaagcataaaggtcaagcttgg
gtagtattcgaggatgtctcctctgctactaatgcaattaggcaaatgcaaggcttcccc
ttttatgacaagcccatgagaattcaatttgcaaagacaaaatcagatataatagcaaaa
gctgatggtacctttgttccccgggaaaaacgtaagagacatgatgacaaaggtaaaaaa
cgaaaggaccaacacgatgctaatcaagctggaatgggcctcaatcctccttatggtggt
gcttatggcacagcacctcctttatcccagataccgtatccgggcggtgcaaaagctatg
gtacctgaggctcctgctcccccaaataatatacttttcattcagaaccttcccaatgag
acagcttccatgatgctgcagatgctgttccttcaatacccaggtttcaaggaagttagg
atggtggaaacaaagcctgggattgcttttgttgagtatgaaaatgagattcaaagcacg
gctgcaatgcaggcactacaaggtttcaagataaccccccagaaccctatggtaatcacc
tatgcaaagaaatag
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