Quillaja saponaria (soapbark tree): O6P43_010852
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Entry
O6P43_010852 CDS
T09778
Name
(GenBank) DNA mismatch repair protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
O6P43_010852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_010852
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
O6P43_010852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PTM_DIR17_Tudor
nSTAND_NTPase5
MutS_II
Tudor_KDM3B
Peptidase_C37
Motif
Other DBs
NCBI-ProteinID:
KAJ7973051
UniProt:
A0AAD7Q1S6
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Position
4:complement(30892796..30902837)
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AA seq
1139 aa
AA seq
DB search
MGDRQSSIHSAKSLPSSPNPALLLLPFPSPSLPFSPSRSLTLAPSPTPLPLSIPSVKSPS
LLLVLHRLHLQLLSFHSPTVPAEKQSYGQEVVGKTIKVYWPLDKAWYHGCVKSFDKDTGK
HLVQYDDAEEELLDLAKEKIELVEESGKKLKRLRRGSSAFKKVEVEDEEVENVDGMKEES
GGTGGGDDDSSDEDWRKNEVAETADDGDEDVELDLEDEAVRLKGKRGSKVNSRKRKMNGG
GVLGSAKKSKSNSGVAKGSSKATFMEATCISESKKASNGFDNVSTADASERFAVREAQKL
WFLGEDRRDAKRRHPEDESYDPRTLYLPPDFLKSLSGGQRQWWEFKSKHMDKVLFFKMGK
FYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ
MELRRKEDGSKDKVVKREVCAVVTKGTLTEEQLLVILGQFRDDSECSALCSILSELRPVE
IVKPAKLLSAETERNIYKCIVDSHVEEDGMGYLPEILVQLVRAGENGSSALSALGGALFY
LKQAFLDDALLRFGKFELLPCFGFNDIVSKPYMVLDAAALENLEIFENSRNGDSSGTLYA
QLNHCVTAFGKRLLKTWLARPLYHLESIRERQEAVAGLRGANLPFALEFRKALSRLSDME
RLLARIFSISEANGRNANKVVLYEDASKKKLQEFIAALRGCELMAQACSSLGVILENVKS
RQLRHLLSPGKVYQSISRNNENYLETQSISYVTIGKEAYLLEVPESSRGTIPQDYELRSS
KKGFFRYWTPDIKQFLGQLSQAGSEKESSLKSILHRLIGRFCEHHMKWRQLVSATAELDV
LISLAITSDYYEGQTCRPNFSGSLCENEVPCLSAKCLGHPVLRSDSLGKGTFVSNDIAIG
GPDHASFILLTGPNMGGKSTLLRQVCLAVISAQVGADVPAESFELSPVDRIFVRMGAKDN
IMAGQSTFLTELSETATMLSSATHNSLVALDELGRGTSTSDGQAIAESVLEHFVRKGAVS
RNVFYALSPIGCRLSERSQGLTLPYGMSSCYGVNVARLAGLPSSVLQKAAAKSREFEATY
GRYRKGSFENCRSHLVDEMGVIMQKLFNLAANLSSHESFDTLCIGSLSELQHKAGVLLQ
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgccaatcgtcaatccacagcgccaaatcacttccttcttcaccaaatcca
gctctcctactccttcccttcccttccccttccctcccattctctccaagcagaagccta
accctagctccgtccccaacaccccttcccctctcaatcccaagcgtaaaatccccatcc
ttgttattggtgcttcatcgccttcatctccagctcctctcattccattcgcctactgtc
cccgctgagaagcaatcatacggacaagaggtagttggtaagacaatcaaggtttactgg
ccactggataaagcctggtatcatgggtgtgttaaatcttttgacaaggatacaggtaag
catttggttcagtacgacgatgccgaagaggaattgttggaccttgcgaaggagaagatt
gagttagttgaagagtcaggaaagaaacttaaacggttgcgtcggggctcgtcggctttc
aagaaggtggaggttgaggatgaggaggtagagaatgtggatggtatgaaagaagaaagt
ggtggtactggcggtggcgatgatgattctagtgacgaagattggaggaagaatgaggtt
gctgaaactgctgatgatggtgacgaagatgtggagttggacttggaggatgaagcggtg
aggttgaaaggaaagcggggtagcaaggttaacagcagaaagcgcaagatgaatggagga
ggggtactggggtctgctaagaagagtaagagcaacagcggtgtggctaagggaagttct
aaggctacgtttatggaggctacatgtatttccgagagtaagaaggcatctaatggtttt
gacaatgtatcaactgccgatgcctcagaaagatttgctgtgcgggaagcgcagaagttg
tggttccttggggaagatcgtagggatgctaaaagaagacatcctgaagatgaaagttat
gatcccagaacattatacttaccccctgatttcttgaagagtttgtcaggtggccagagg
caatggtgggagttcaagtccaagcatatggacaaagttctgtttttcaagatgggtaaa
ttttatgaactctttgaaatggatgcacatataggagcgaaagaacttgatttgcaatat
atgaagggggaacaacctcactgtggatttccagagaggaacttctcaatgaatgtggag
aaactggctagaaagggttaccgagttcttgttgtagaacagactgaaacacctgaacaa
atggagcttcgtcggaaagaggatggttccaaagataaggttgtgaagcgtgaagtatgt
gcagtggttacaaaaggcacactaactgaggagcagttgctagtcattcttggacagttt
agggatgattcagagtgcagtgccttgtgttctattttgtctgagctcaggccagtagag
attgtcaaacctgctaagctgctcagtgctgaaacagagagaaatatctacaagtgtata
gttgattctcatgttgaagaagatggaatgggctacctacccgaaattttggtgcagcta
gtgagggcaggcgagaatggaagtagtgcactttctgctcttggtggtgctcttttttat
ctgaaacaggcgttcctggatgatgcattgcttagatttggaaaattcgagttacttcca
tgttttggtttcaatgatattgtttcgaaaccgtacatggttcttgatgccgcagccttg
gagaatcttgagattttcgagaatagcaggaatggagattcttcaggtaccctgtatgca
caattaaaccactgtgtcactgcatttgggaagagattattaaagacgtggcttgcaaga
ccattgtatcatttagagtcaatcagggaacgccaagaagctgtggccggtctaagggga
gctaatctaccttttgccctagaatttcgaaaagccttatcaagactatcagacatggaa
cggctacttgcacgcatcttctctatcagtgaagctaatggaaggaatgcaaataaagtg
gttctgtatgaggatgcatccaagaaaaaactgcaagagtttattgcagcactacgtggt
tgtgaactaatggcacaagcatgttcttcacttggtgtcattttggagaatgtcaaatca
agacagcttcgtcatttgttaagtcctggtaaagtttatcaaagtatctcaaggaacaac
gaaaattacttggagacacaatcaatctcatatgtcactattggaaaagaggcctacctt
ttggaagttccagagagttctcgtgggaccattcctcaggattatgagttgcgttcatcc
aaaaagggtttcttcaggtattggacaccagacattaagcagttcttgggacagctatcc
caagctgggtctgaaaaggaatcctccctgaaaagtattttacataggttaattggacgt
ttttgtgaacatcacatgaagtggaggcagttggtttctgcaactgcagagctggacgtt
ttgatcagtctagctataacaagtgactattatgaaggacaaacatgccgaccaaatttc
tcaggctcattatgtgaaaatgaagttccatgcctctctgcaaaatgtttggggcatcct
gttcttaggagtgattctttaggcaagggtacctttgtttccaatgacattgccattggt
ggtccagatcatgccagctttatactcctaactggtcctaatatgggtggaaagtcaact
cttcttcgccaagtttgcttggctgtgatatcggcacaggtaggagcagatgtacctgct
gaaagttttgaattgtcacctgtggacagaatatttgtccggatgggagcgaaagataat
attatggcaggacaaagtacgtttttaacggaactttcagaaactgcaacaatgctgtca
tcggcaacccataattcgttagtggctctagatgagcttggacgtggaacctccacttca
gacgggcaagctattgcggaatcagtactcgaacattttgtacggaaaggtgcagtgtcg
cggaatgttttctacgcattatcaccgattggctgtagattatcagaaagatcccaaggt
ctcactctgccatatggcatgtcaagttgctatggtgttaatgttgctcggttagctgga
ctcccaagttctgttcttcagaaggctgctgctaaatcaagagaatttgaggcgacatat
ggtagatacagaaagggatcttttgaaaactgtcgaagtcatttggttgatgagatggga
gtaatcatgcaaaaattatttaaccttgctgcaaatttgagtagccatgaatcttttgat
actctttgcattggctcactgagtgaacttcaacataaagcaggggtactactgcagtga
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