KEGG   Quillaja saponaria (soapbark tree): O6P43_010852
Entry
O6P43_010852      CDS       T09778                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    O6P43_010852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qsa03400]
    O6P43_010852
DNA repair and recombination proteins [BR:qsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     O6P43_010852
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV PTM_DIR17_Tudor nSTAND_NTPase5 MutS_II Tudor_KDM3B Peptidase_C37
Other DBs
NCBI-ProteinID: KAJ7973051
UniProt: A0AAD7Q1S6
LinkDB
Position
4:complement(30892796..30902837)
AA seq 1139 aa
MGDRQSSIHSAKSLPSSPNPALLLLPFPSPSLPFSPSRSLTLAPSPTPLPLSIPSVKSPS
LLLVLHRLHLQLLSFHSPTVPAEKQSYGQEVVGKTIKVYWPLDKAWYHGCVKSFDKDTGK
HLVQYDDAEEELLDLAKEKIELVEESGKKLKRLRRGSSAFKKVEVEDEEVENVDGMKEES
GGTGGGDDDSSDEDWRKNEVAETADDGDEDVELDLEDEAVRLKGKRGSKVNSRKRKMNGG
GVLGSAKKSKSNSGVAKGSSKATFMEATCISESKKASNGFDNVSTADASERFAVREAQKL
WFLGEDRRDAKRRHPEDESYDPRTLYLPPDFLKSLSGGQRQWWEFKSKHMDKVLFFKMGK
FYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ
MELRRKEDGSKDKVVKREVCAVVTKGTLTEEQLLVILGQFRDDSECSALCSILSELRPVE
IVKPAKLLSAETERNIYKCIVDSHVEEDGMGYLPEILVQLVRAGENGSSALSALGGALFY
LKQAFLDDALLRFGKFELLPCFGFNDIVSKPYMVLDAAALENLEIFENSRNGDSSGTLYA
QLNHCVTAFGKRLLKTWLARPLYHLESIRERQEAVAGLRGANLPFALEFRKALSRLSDME
RLLARIFSISEANGRNANKVVLYEDASKKKLQEFIAALRGCELMAQACSSLGVILENVKS
RQLRHLLSPGKVYQSISRNNENYLETQSISYVTIGKEAYLLEVPESSRGTIPQDYELRSS
KKGFFRYWTPDIKQFLGQLSQAGSEKESSLKSILHRLIGRFCEHHMKWRQLVSATAELDV
LISLAITSDYYEGQTCRPNFSGSLCENEVPCLSAKCLGHPVLRSDSLGKGTFVSNDIAIG
GPDHASFILLTGPNMGGKSTLLRQVCLAVISAQVGADVPAESFELSPVDRIFVRMGAKDN
IMAGQSTFLTELSETATMLSSATHNSLVALDELGRGTSTSDGQAIAESVLEHFVRKGAVS
RNVFYALSPIGCRLSERSQGLTLPYGMSSCYGVNVARLAGLPSSVLQKAAAKSREFEATY
GRYRKGSFENCRSHLVDEMGVIMQKLFNLAANLSSHESFDTLCIGSLSELQHKAGVLLQ
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgggcgatcgccaatcgtcaatccacagcgccaaatcacttccttcttcaccaaatcca
gctctcctactccttcccttcccttccccttccctcccattctctccaagcagaagccta
accctagctccgtccccaacaccccttcccctctcaatcccaagcgtaaaatccccatcc
ttgttattggtgcttcatcgccttcatctccagctcctctcattccattcgcctactgtc
cccgctgagaagcaatcatacggacaagaggtagttggtaagacaatcaaggtttactgg
ccactggataaagcctggtatcatgggtgtgttaaatcttttgacaaggatacaggtaag
catttggttcagtacgacgatgccgaagaggaattgttggaccttgcgaaggagaagatt
gagttagttgaagagtcaggaaagaaacttaaacggttgcgtcggggctcgtcggctttc
aagaaggtggaggttgaggatgaggaggtagagaatgtggatggtatgaaagaagaaagt
ggtggtactggcggtggcgatgatgattctagtgacgaagattggaggaagaatgaggtt
gctgaaactgctgatgatggtgacgaagatgtggagttggacttggaggatgaagcggtg
aggttgaaaggaaagcggggtagcaaggttaacagcagaaagcgcaagatgaatggagga
ggggtactggggtctgctaagaagagtaagagcaacagcggtgtggctaagggaagttct
aaggctacgtttatggaggctacatgtatttccgagagtaagaaggcatctaatggtttt
gacaatgtatcaactgccgatgcctcagaaagatttgctgtgcgggaagcgcagaagttg
tggttccttggggaagatcgtagggatgctaaaagaagacatcctgaagatgaaagttat
gatcccagaacattatacttaccccctgatttcttgaagagtttgtcaggtggccagagg
caatggtgggagttcaagtccaagcatatggacaaagttctgtttttcaagatgggtaaa
ttttatgaactctttgaaatggatgcacatataggagcgaaagaacttgatttgcaatat
atgaagggggaacaacctcactgtggatttccagagaggaacttctcaatgaatgtggag
aaactggctagaaagggttaccgagttcttgttgtagaacagactgaaacacctgaacaa
atggagcttcgtcggaaagaggatggttccaaagataaggttgtgaagcgtgaagtatgt
gcagtggttacaaaaggcacactaactgaggagcagttgctagtcattcttggacagttt
agggatgattcagagtgcagtgccttgtgttctattttgtctgagctcaggccagtagag
attgtcaaacctgctaagctgctcagtgctgaaacagagagaaatatctacaagtgtata
gttgattctcatgttgaagaagatggaatgggctacctacccgaaattttggtgcagcta
gtgagggcaggcgagaatggaagtagtgcactttctgctcttggtggtgctcttttttat
ctgaaacaggcgttcctggatgatgcattgcttagatttggaaaattcgagttacttcca
tgttttggtttcaatgatattgtttcgaaaccgtacatggttcttgatgccgcagccttg
gagaatcttgagattttcgagaatagcaggaatggagattcttcaggtaccctgtatgca
caattaaaccactgtgtcactgcatttgggaagagattattaaagacgtggcttgcaaga
ccattgtatcatttagagtcaatcagggaacgccaagaagctgtggccggtctaagggga
gctaatctaccttttgccctagaatttcgaaaagccttatcaagactatcagacatggaa
cggctacttgcacgcatcttctctatcagtgaagctaatggaaggaatgcaaataaagtg
gttctgtatgaggatgcatccaagaaaaaactgcaagagtttattgcagcactacgtggt
tgtgaactaatggcacaagcatgttcttcacttggtgtcattttggagaatgtcaaatca
agacagcttcgtcatttgttaagtcctggtaaagtttatcaaagtatctcaaggaacaac
gaaaattacttggagacacaatcaatctcatatgtcactattggaaaagaggcctacctt
ttggaagttccagagagttctcgtgggaccattcctcaggattatgagttgcgttcatcc
aaaaagggtttcttcaggtattggacaccagacattaagcagttcttgggacagctatcc
caagctgggtctgaaaaggaatcctccctgaaaagtattttacataggttaattggacgt
ttttgtgaacatcacatgaagtggaggcagttggtttctgcaactgcagagctggacgtt
ttgatcagtctagctataacaagtgactattatgaaggacaaacatgccgaccaaatttc
tcaggctcattatgtgaaaatgaagttccatgcctctctgcaaaatgtttggggcatcct
gttcttaggagtgattctttaggcaagggtacctttgtttccaatgacattgccattggt
ggtccagatcatgccagctttatactcctaactggtcctaatatgggtggaaagtcaact
cttcttcgccaagtttgcttggctgtgatatcggcacaggtaggagcagatgtacctgct
gaaagttttgaattgtcacctgtggacagaatatttgtccggatgggagcgaaagataat
attatggcaggacaaagtacgtttttaacggaactttcagaaactgcaacaatgctgtca
tcggcaacccataattcgttagtggctctagatgagcttggacgtggaacctccacttca
gacgggcaagctattgcggaatcagtactcgaacattttgtacggaaaggtgcagtgtcg
cggaatgttttctacgcattatcaccgattggctgtagattatcagaaagatcccaaggt
ctcactctgccatatggcatgtcaagttgctatggtgttaatgttgctcggttagctgga
ctcccaagttctgttcttcagaaggctgctgctaaatcaagagaatttgaggcgacatat
ggtagatacagaaagggatcttttgaaaactgtcgaagtcatttggttgatgagatggga
gtaatcatgcaaaaattatttaaccttgctgcaaatttgagtagccatgaatcttttgat
actctttgcattggctcactgagtgaacttcaacataaagcaggggtactactgcagtga

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