Quillaja saponaria (soapbark tree): O6P43_011087
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Entry
O6P43_011087 CDS
T09778
Name
(GenBank) putative Arginine/serine-rich splicing factor
KO
K12890
serine/arginine-rich splicing factor 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_011087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_011087
Spliceosome [BR:
qsa03041
]
Common components
Common spliceosomal components
SR proteins
O6P43_011087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7973332
UniProt:
A0AAD7Q1X6
LinkDB
All DBs
Position
4
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AA seq
294 aa
AA seq
DB search
MSRRSSRTIYVGNLPGDIRMREVEDLFYKYGAIVDIDLKVPPRPPGYAFVEFEDPRDADD
AIRYRDGFSFDGHRLRVELAHGGRGYSSSADRYSSYSSSGSSRGASRRSDYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFARA
YVRVREYDSRRSYSRSPSHDSRRSYSRSPSRSPYISRSRSHSYSDRSRSLTPKAQYSRRS
ESRSRSRSISRSPNSSPPPRESFSPSRSGRSLLRSRSPSAPSERSGSVDSRDHY
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccgctctagccgtactatttatgttggcaatcttcctggagacattcgtatg
agagaggtagaggatttgttttacaagtatggagccattgttgacattgatttgaaggtc
cctccaaggccaccgggttatgcttttgtggagtttgaggatccccgtgatgctgatgat
gccattcgctatcgagatggttttagctttgatggtcatcgattacgggttgaacttgca
catggtgggcggggatattcatcatcagctgatcgctatagtagttatagtagtagtggc
agtagccgtggggcttctaggcgttctgattatcgtgttttggtcactggattaccttct
tcagcttcatggcaagacctgaaggaccacatgcgtaaagctggtgatgtctgcttctct
caagtgttccgtgatcgtggtgggatgactgggattgtggactacactaactatgatgat
atgaagtatgctataaggaaactcgatgactctgagtttcgtaatgccttcgctcgggca
tatgtacgggtgagggagtacgattcaagacggagttactctaggagtcccagtcatgat
tctagacggagttattctagaagtcctagccgcagtccttacatttctcgtagtcgaagc
catagttacagtgacaggagtagaagtttgactccaaaggcccaatattcgcggcgttct
gaatctcgttcaagatcccgttccatatccagatctccaaattcatctcctcctccccga
gagagtttcagtcccagcaggagtggcagaagcttattgcggtcccgatccccttcagct
ccatctgaacgaagcggatctgtggactcgagggaccattattaa
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