Quillaja saponaria (soapbark tree): O6P43_011367
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Entry
O6P43_011367 CDS
T09778
Name
(GenBank) Histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03082
ATP-dependent chromatin remodeling
qsa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
O6P43_011367
03083 Polycomb repressive complex
O6P43_011367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_011367
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
O6P43_011367
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
O6P43_011367
HDAC complexes
Sin3A-HDAC complex
O6P43_011367
BRAF-HDAC complex
O6P43_011367
REST complex
O6P43_011367
SHIP complex
O6P43_011367
MiDAC complex
O6P43_011367
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
O6P43_011367
Heterochromatin formation proteins
Other heterochromatin formation proteins
O6P43_011367
Chromatin remodeling factors
NuRD complex
O6P43_011367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
KAJ7967053
UniProt:
A0AAD7LZR0
LinkDB
All DBs
Position
5
Genome browser
AA seq
326 aa
AA seq
DB search
MTYALLAHYGLLQHMQVLKPFPARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNA
GEDCPVFDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDI
VLAILELLKQHERVLYIDIDIHHGDGVEEALYNTERVMTGVMRQELLLEWKLMTKCHKHE
YYEYFGPDYTLHVAPSNMENKNSHQLLDEIRCTLLDYISNLQHAPSVQFQERPPDFDLPE
ADEDQDTFDEQWDPNSDMNVDGKREPLPSKVKREVVELHLNDLGQKDNVEHSIASDIAMA
ETSSTKAMDMDLLPVNEPNTKVEPVI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacatatgctcttcttgcccactatggattgcttcagcacatgcaggtcctcaagccc
ttccctgctagagacagggacctttgccgctttcatgctgatgattacgttgcgttcctt
agaagtataacccctgaaacgcaacaggatcagctgaggcagctcaaacgctttaatgct
ggtgaagattgccctgtatttgatggcctctattctttttgtcaaacttatgctggtgga
tcagttggtggtgctgtcaaattgaatcatgaccagtgtgatattgctgtcaactgggct
ggtgggctgcaccatgccaagaagtgtgaagcttctggattttgctatgttaatgatata
gtcctggcaatcttggagcttcttaaacagcatgagcgtgttttatacattgatattgat
atccaccatggagatggtgtggaggaggcattgtacaatactgagagagtcatgactggt
gttatgagacaggagttgctcttggaatggaagttgatgacaaaatgccacaagcatgag
tattatgagtattttggtccagattatactcttcatgttgctccgagtaacatggaaaat
aagaattcccaccaattactggatgaaatacgttgtacacttcttgactatatttccaat
ctgcagcatgctcccagtgtccaatttcaggaaagaccacctgattttgatcttccagag
gctgatgaagaccaggatacttttgatgagcagtgggatccaaattctgacatgaatgtc
gatggcaagcgtgagcctttgccaagcaaagtaaagagagaagtagttgaactacatctt
aatgatttgggccagaaggacaatgttgagcactccatagcctctgatattgcaatggct
gaaacaagcagcacgaaggctatggatatggaccttctccctgtgaatgagcctaacacg
aaagttgagcctgttatttga
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integrated database retrieval system