KEGG   Quillaja saponaria (soapbark tree): O6P43_011369
Entry
O6P43_011369      CDS       T09778                                 
Name
(GenBank) Histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03082  ATP-dependent chromatin remodeling
qsa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    O6P43_011369
   03083 Polycomb repressive complex
    O6P43_011369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qsa03036]
    O6P43_011369
Enzymes [BR:qsa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     O6P43_011369
Chromosome and associated proteins [BR:qsa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     O6P43_011369
   HDAC complexes
    Sin3A-HDAC complex
     O6P43_011369
    BRAF-HDAC complex
     O6P43_011369
    REST complex
     O6P43_011369
    SHIP complex
     O6P43_011369
    MiDAC complex
     O6P43_011369
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     O6P43_011369
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    O6P43_011369
  Chromatin remodeling factors
   NuRD complex
    O6P43_011369
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-ProteinID: KAJ7967055
UniProt: A0AAD7LZ69
LinkDB
Position
5
AA seq 492 aa
MDTGGNSLPSGPDGLKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPFPARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDSGHGKGKYYSLNVPLDDGI
DDESYHFLFKPLIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHQLLDEIRCTLLDYLSNLQHAPSVQFQERPPDFDLPEADEDQDNFDERWDPDSDMNV
DGKREPLPSKVKREVVEPQLNDLEGQKDNAEHSIASDIAMAETSSTKAMDMDLLPVNEPN
TKVERDSMNGPV
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggatactggaggtaattctctaccatctggacctgatggtttgaagaggaaggtctgt
tatttctatgatccagaggtcggaaattactattatgggcaaggtcaccctatgaagcca
catcgcatacggatgacacatgctcttcttgcccactatggattgcttcagcacatgcag
gtcctcaagcccttccctgctagagacagggacctttgccgcttccatgctgatgattac
gttgcgttccttagaagtataacccctgaaacgcaacaggatcagctgaggcagctcaaa
cgctttaatgttggtgaagattgccctgtatttgatggactctattctttttgtcaaact
tatgctgggggttcagttggtggtgctgtcaaattgaatcatgaccagtgtgatattgct
gtcaactgggctggtgggctacaccatgccaagaagtgtgaggcttctggattttgctat
gttaatgatatagtcctggcaatcttggagcttcttaaacagcatgagcgtgttttatac
gttgatattgatatccaccatggagatggtgtggaggaggcattttacactaccgataga
gtcatgactgtatcattccataaatttggggactattttcctggtacaggggatatacgt
gatagcggacatggaaaggggaaatactactcccttaatgttccattagatgacgggatt
gatgatgaaagctatcatttcctgttcaaacccttaattggaaaagtaatggaagttttc
aggcctggtgcagtagttctccaatgcggtgctgactctttatcaggggacagattaggg
tgcttcaatctttcaattaaaggtcatgcagagtgtgtcagatacatgagatcattcaat
gtgccactcttgcttctaggtggtggtggttataccattcggaatgttgcccggtgctgg
tgctatgagacaggagttgctcttggaatggaagttgatgacaaaatgccacaacatgag
tattatgagtattttggtccagattatactcttcatgttgctccgagtaacatggaaaat
aagaattcccaccaattactggatgaaatacgttgtacacttcttgactatctttccaat
ctgcagcatgctcccagtgtccaatttcaggaaagaccacctgattttgatcttccagag
gctgatgaagaccaggataattttgatgagcggtgggatccagattctgacatgaacgtc
gatggcaagcgtgaacctttgccaagcaaagtaaagagagaagtagttgaaccacagctt
aatgatttggagggccagaaggacaatgctgagcactccatagcctctgatattgcaatg
gctgaaacaagcagcacgaaggctatggatatggaccttctccctgtgaatgagcctaac
acgaaagttgagcgggattcgatgaatgggcctgtttag

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