Quillaja saponaria (soapbark tree): O6P43_011435
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Entry
O6P43_011435 CDS
T09778
Name
(GenBank) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_011435
Spliceosome [BR:
qsa03041
]
Common components
Common spliceosomal components
General mRNP proteins
O6P43_011435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-ProteinID:
KAJ7967135
UniProt:
A0AAD7M1P7
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All DBs
Position
5:657073..664597
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AA seq
600 aa
AA seq
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MDFDEYDYLEKTTNGGNGTLEDDKKDRSRSSKYKSNEKDNEIDRRSKRSRSGDELRDYDH
QKERGSSRHRSRSRDGDKERDRHRSSREQRDKEKDRNRDREERNGRERDRDQEHDRDRDR
DRKNRGTESERERDREKETERSRRSRSHSERHRSDIDERERGRSHDRDYRDRERSRDKEN
RDKERERELRDRDRESRRHKEKKEEAAEPEVDPERDQRTVFAYQISLKADEKDVYEFFSR
AGKVRDVRLIMDRNSRRSKGVGYIEFFDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLV
QSTAVATGSGIGPYSGGARRLYVGNLHFNMTEIDLRRVFEAFGQVELVQLPLDETGHCKG
FGFVQFARLEDARNAQSLNGQLEIAGRTIKVSAITDQTGMQDVGGNTGDFDDDDSLSLNA
CSRAVLMQKLDRSGTASSITGSLGIPAANSTGLHVPAGPILGAAPVVSPLASVPALAALP
GGGLQLPTAAAAATVPSIDTIGVPSECLLLKNMFDPNDEKEPGFDLDIKEDVQDECSKYG
NLKHIYVDKNTAGFVYLRFENTQSALSAQRALHGRWFAGKMITAMFMVPQSYEAQFPDSR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgattatttggagaaaacaactaatggtggcaatggaactttg
gaggatgacaagaaagatcgtagtcggagttccaagtataagagtaatgagaaggataac
gaaatcgaccgtcgttctaagcgatcaagatctggagatgagttgcgtgattatgatcat
cagaaagagaggggatcatctcgtcatcggtcacggtccagagatggagacaaggaaagg
gaccgccataggagtagcagggaacaaagggataaggaaaaagataggaacagagatagg
gaagagaggaatgggagagaaagagatagggatcaagagcatgaccgtgatcgagataga
gacaggaaaaaccgtggtacggagagtgaaagggagagggacagggagaaggagacagag
cgctcacgaagaagcaggagtcattctgaaaggcatcgcagtgatatagatgaaagagaa
agaggaaggagtcacgatagggactatagagacagagagagaagccgagacaaggagaat
cgagacaaagaaagggagagagagttaagggaccgggatagagaaagcagacgacataaa
gagaaaaaggaagaggcagcagaaccagaggttgatcctgaacgggatcagaggactgtg
tttgcttatcagatttctctaaaagcggatgaaaaagatgtctatgagttcttctcgagg
gctggcaaggtccgagatgtgcgactaataatggatcgcaactcaaggcgttctaagggc
gttgggtatattgagttttttgatgtgatgtcagtcccaatggcaatagcactttctggc
cagcctcttcttggtcaaccagtgatggtgaagccatcagaagcagaaaagaatctggtt
cagtcgacagctgtggccactggatcaggtataggtccctattctggaggagcgagaagg
ctgtatgttggcaatctgcatttcaacatgactgaaattgatcttcgcagggtgtttgaa
gcatttggccaagtagagctagtgcaattgcctctcgatgaaactgggcattgcaaaggt
tttggttttgtccagtttgcacgccttgaagacgcgagaaatgcccagagtttgaatgga
caattggagattgctggtcggacaatcaaggtatccgctattactgatcaaacaggaatg
caagatgttggtgggaatactggtgattttgatgatgatgacagcttgtccttgaatgca
tgttctcgagcagtactcatgcagaagttggatcgcagtggcactgcatcaagcattact
ggttcactaggcattcctgctgccaacagcacaggcctccatgtaccggcaggaccaatc
ctgggagctgcaccagtggtttctccacttgcttcagttcctgctctagctgcactgcct
ggtggaggtctccaactccccaccgctgctgctgcagctacagttccttcaattgatact
attggtgttccaagtgaatgcttgctgctgaagaacatgtttgacccaaatgatgagaag
gaaccaggctttgatttggatattaaagaagacgtccaagatgaatgttctaagtatgga
aatcttaaacatatatatgttgacaaaaacactgctggttttgtctacttgcgatttgaa
aatacacaatctgcattatctgcacagcgggcactgcatggtagatggtttgctggaaag
atgatcactgcaatgttcatggtgccgcagagctacgaggctcagtttcctgacagcaga
taa
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