Quillaja saponaria (soapbark tree): O6P43_011607
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Entry
O6P43_011607 CDS
T09778
Name
(GenBank) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
O6P43_011607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_011607
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_011607
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
O6P43_011607
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
O6P43_011607
PBAF complex
O6P43_011607
GBAF(ncBAF) complex
O6P43_011607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-ProteinID:
KAJ7967336
UniProt:
A0AAD7M0C3
LinkDB
All DBs
Position
5
Genome browser
AA seq
1055 aa
AA seq
DB search
MEEKRRDVGALPPAITESPVSEPASSRRRAQKRKNNSLNLLSSSSTPSKRITRESASFAH
PPIHIGSLTRARQIPNNFAAVASELSAGVAASSADTVVKQTAQAVPIQALGGSFTLAEEL
NKQRKRKALEAGIEAEFEAIRSRSTNVHVVPSHCGWFSWTTIHPIEERTLPSFFAGKTEN
RTLDVYMEIRNWIMKKFHAKPDAQIELKDLSELDVGELDARQEVMEFLDHWGLINFHPFP
STDTVVASADDDGEAEKKSLGQSLYHFDTMQFCSPVIPKTNLMSPALPSRLFPDSAIAEA
FLRQEGPVVEYHCNSCSTDCSRKRYHCQKQADFDLCTDCFNNGKFGSGMSVLDFILMEPA
EVPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIQDTFLDC
DDDIDANSKGTSDPSTTKNDSSVPENASEMMESKTADGEGQALARSNGTSKAEDFSEVKV
REGTPKSEDICEEKISDETCKIKSTSDVKLIQKTGEDCAIKALSEAFEAVGYVPGAEGPL
SFAEVGNPVMALAVFLARLVGSDVAIASAHSSLKSISGNSPAMQLAARHCFVLEDPPDDD
KEPSNSERDSLKDRKPDDRNEKQDKSVDEGALSKKFNGKKNETIASEEKGLLVSLSEESS
EKPVAVKEKEVTVNHGEIVLGNCNDTSDMESAKDQPPSTLQEPNDLTSKVELLPISAESG
EGNFAKETSAPTEETKDVHAVSNSLSSERNEPKQSAISNSEGERPMPSGAPTDVEMVFHS
QSSEKTKPQIRLMPNPVEDPLERSESLMDVETVPDSLPSDKNEIQPLVTSEPSQCSTEGG
KDVGMESGSLPMEKNGSLQPVTSNAGAVNGASTGENHTENGKEVKHICKGTNDDHKLTKV
KHAAVCAIAAASVKAKLLANQQEDQIQHLATMLIEKQLHKLETKLAFFNEMENVVMRVRE
HLDRSRQKLYHERVQIIASRLGSPASSSKVVPPSLPTNRIPMNFANSVPRGPRPPMSMIL
ERPPPASRPMGTVGAIPSNSLASSTTAGNAIRQSM
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgccgtgatgtcggagctctacctccggcaatcaccgaatcgccagta
tctgagccagcttcatcaaggcgccgtgctcaaaagagaaagaataacagtctcaacctg
ttgagttcttcatcaactccgtcgaaacgcattactcgggagagtgcttcatttgctcac
ccgccgatccacatcggttctttgacaagagctcgtcaaatccccaataattttgccgct
gtggcttccgagttgtcggctggcgttgcagcttcctctgctgacactgttgtgaagcag
actgcgcaggcggtcccaattcaagcactgggaggttcgtttacgctggctgaggaattg
aacaagcagcgcaagcggaaggcgttggaagctggtattgaagccgagttcgaagctatc
agatctcgcagtaccaacgttcacgtggttcctagtcattgcggttggttttcatggacg
acgatccaccctattgaggagcgcacacttccttcattctttgctgggaagactgagaat
cggactcttgatgtatacatggagatacgtaattggattatgaagaaattccatgcaaaa
ccagatgcacaaatcgaattgaaagatctgtcagagcttgatgttggagaattggatgct
aggcaagaggtaatggagtttcttgaccattggggtttgattaatttccacccgttccca
tctacagatactgtagtggccagtgctgatgatgatggagaagcagaaaagaaatccctg
ggtcaaagtttgtatcattttgataccatgcaattctgttcgcctgttattcccaagact
aatctaatgagtccagctttgccatctcgcttgtttcccgattctgcaattgctgaggcg
tttttgagacaggaggggccagtagttgagtaccattgcaactcttgttccactgattgc
tctcgaaagcgctaccattgccaaaagcaggcagattttgatctatgtaccgattgcttt
aataacggaaaatttggttcgggcatgtctgtattggacttcatactcatggaacctgct
gaagttcctggtgtaagtggtgggaagtggactgatcaggagacccttcttctacttgaa
gcattagaactttataaagaaaattggaatgaaattgccgagcacgttgcaacaaaaaca
aaggctcagtgtatattgcactttgttcaaatgccaattcaagatacatttcttgattgt
gatgatgatattgatgccaactccaaaggaacttcagatccatccactactaaaaatgat
tcatctgtccccgaaaatgcctctgagatgatggagagcaagactgctgatggtgagggc
caggcgctggcccgctcaaatggaacttcaaaagccgaagattttagtgaggtgaaagtt
agggagggtactccaaaatcagaagatatttgtgaagagaaaattagtgatgaaacttgc
aagataaaaagtaccagtgacgtgaagcttattcagaagacaggagaagattgtgcaatc
aaggctcttagtgaagcatttgaagctgttggttatgttcctggagccgaaggcccactt
tcgtttgctgaagtgggaaaccctgtcatggcactggcagttttcctggcaaggttggtg
ggatctgatgttgctattgcttcagctcacagttccttaaaatccatatctggaaattct
cctgcaatgcagctggctgcaaggcattgctttgtcttggaagatccacctgatgatgat
aaggagccaagtaattctgagagggattctctgaaagacagaaaacctgatgaccgaaat
gaaaaacaggataagtctgtggatgaaggagctttatcaaaaaaatttaatggcaagaaa
aacgaaactattgcttcagaagagaagggactgctggtttctctaagtgaggagtcctct
gaaaaaccagttgctgtgaaggagaaagaagttactgttaatcatggagaaattgtcctt
ggtaactgcaatgatacaagtgatatggagtcagcaaaggaccaaccaccaagcactttg
caggaaccaaatgatttaacatccaaggttgagcttctgccaatttctgcagagtcagga
gaaggaaattttgctaaagagacttctgcgccaacagaggagacaaaggatgtgcatgca
gtatccaattctctatcttcagaaaggaatgagcctaagcagtcagctatatccaattct
gagggagagcgcccaatgccttctggtgcacctactgatgtggagatggtgtttcattct
cagtcttcagagaagaccaagccacagatacgattgatgccgaatccagtggaagacccc
ctggaaagatctgaatcactaatggatgttgagacggtgccagattctttgccatcagat
aaaaatgaaattcagccactagttacatccgagccctctcaatgtagtacagaaggagga
aaagatgtaggcatggagtctggttctctgcccatggagaagaatgggtctttgcaacca
gtgacatcaaatgctggagctgtaaatggagcaagcacaggtgaaaatcacaccgaaaat
ggaaaagaagtgaaacatatctgtaaggggacaaatgacgatcacaaacttaccaaggta
aagcatgcagcagtttgcgcaattgctgcagcatcagttaaagcaaaactccttgcaaac
cagcaagaagatcaaattcaacatcttgctactatgttgattgaaaagcagttgcataag
ctggaaacgaagttagctttttttaatgagatggagaatgtggtaatgagagtaagggag
catttggacaggtcaaggcagaagctttaccatgaacgtgtacagattattgcatcccgg
cttggttcaccagcttcatcgtctaaagtagtgccaccatccttacctaccaacagaatt
cccatgaattttgcaaactctgttccaagaggaccaagaccacccatgagcatgatcctt
gaaaggccaccaccagcttctaggcccatggggactgtgggtgctatcccatcaaattca
ttagcatcttcaacaacagcaggaaatgcaattcggcaatccatgtag
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