Quillaja saponaria (soapbark tree): O6P43_011998
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Entry
O6P43_011998 CDS
T09778
Name
(GenBank) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_011998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_011998
Spliceosome [BR:
qsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
O6P43_011998
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-ProteinID:
KAJ7967783
UniProt:
A0AAD7PTX2
LinkDB
All DBs
Position
5
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AA seq
571 aa
AA seq
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MTSKREANDGMEEEEFNPNSKRQKLLEESSPSPPPVSIANPLSGLANNYGDDDEEEDDER
RELDNGRERDEVDRNQQNGHGLVEKNEQTELSDSDDNEQPFGQGRHNRQMEVRRDCPYLD
TVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYFQGRGKNSHAYTHSLEAGHHVYINLRT
EKVYCLPDGYEINDPSLDDIRHVLNPRVTREQVEQLDKNKQWSRALDGSDYLPGMVGLNN
IKETDFVNVTIQSLMRVTPLRNFFLIPENYKHCKSPLVHRFGELTRKIWHARNFKGQVSP
HEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRTSKNNRSIIYKCFQGELEVVK
EIPNKVITEKKETSNDQKSTEKVADGGTEHGAVVTETSRMPFLMLGLDLPPPPLFKDVME
KNIIPQVPLFNILNKFDGKTITEVVRPHIARMRYCVTRLPPYLILHMRRFTKNNFFVEKN
PTLVNFPVKNLELKDYIPLPAPKENERFRSKYDLIANIVHDGKPGEGFYRVFVQRKSEEL
WYEMQDLHVSETLPQMVALSEAYMQIYEQHQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaagagagaagccaacgatgggatggaggaggaagagtttaatccaaactcg
aaacggcaaaaattgcttgaggagtcatccccatctcctcctccagtttccattgcaaat
ccactttctgggttagcaaataattatggtgacgatgatgaagaggaagatgatgagaga
agggaattggataatggtagagaaagagatgaagttgataggaaccagcaaaatgggcat
gggctcgtagagaaaaatgagcaaacggaactgtctgatagtgatgacaatgaacaacca
tttggtcaaggaaggcacaaccgtcaaatggaagtccggcgggactgtccttatcttgat
accgttaaccgacaggttttggattttgattttgagaagttttgttctgtctctctgtca
aatttgaatgtctatgcatgtttggtctgtggaaaatatttccaaggaagagggaagaac
tctcatgcttatactcatagccttgaagcaggacaccatgtctatatcaatcttcgaact
gaaaaagtttactgccttcctgatggctatgaaattaatgatccatctttagatgacatt
cgacatgttctaaacccaagggttactagggaacaagttgaacagcttgacaaaaacaag
caatggtctagggcacttgatggttctgattaccttcctggaatggtggggcttaataac
attaaagagacagattttgtaaatgtgaccattcaatctttaatgagagtcactccattg
aggaattttttccttattccggaaaactacaagcactgcaaatctcctcttgttcatcga
tttggagaactcactagaaagatttggcatgcacggaactttaaaggacaggtgagccca
catgaatttctgcaggcagtgatgaaagccagtaaaaaacgatttagaataggtgctcaa
tctgacccagttgaattcatgtcatggcttcttaatacactgcatgcagatcttagaact
tcaaagaataatagaagcataatctacaagtgctttcagggggaactggaagttgtaaaa
gaaattcccaacaaagttataaccgagaagaaagaaaccagcaatgatcagaagtccaca
gagaaggttgcagatggtggaacagagcatggagctgttgtcacagaaacttccaggatg
ccgtttctaatgctaggattggatttgccgccacctcctctttttaaagatgtgatggag
aaaaatataataccgcaggttcctctctttaacatacttaataagtttgacggcaagact
atcacagaggtggtgcgtcctcatattgcacggatgagatattgtgttactagattgcca
ccgtatctgattctccacatgcgtcgatttacaaagaacaacttttttgtggaaaagaat
cctactttggtcaactttcctgtgaagaacctggaattgaaagattatattcccttgcca
gcacccaaagagaatgagagattccgttctaagtatgatctgattgccaatatagttcat
gatggtaaacctggtgaagggttttatagggtatttgtgcagcggaagtcagaagaatta
tggtacgagatgcaggatcttcatgtttcagaaacacttcctcaaatggttgcactctca
gaggcttatatgcagatatatgagcagcaccagtaa
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