KEGG   Quillaja saponaria (soapbark tree): O6P43_012064
Entry
O6P43_012064      CDS       T09778                                 
Name
(GenBank) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03020  RNA polymerase
qsa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O6P43_012064
  09124 Replication and repair
   03420 Nucleotide excision repair
    O6P43_012064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsa03021]
    O6P43_012064
   03400 DNA repair and recombination proteins [BR:qsa03400]
    O6P43_012064
Transcription machinery [BR:qsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     O6P43_012064
DNA repair and recombination proteins [BR:qsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      O6P43_012064
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-ProteinID: KAJ7967866
UniProt: A0AAD7M0U0
LinkDB
Position
5
AA seq 255 aa
MSEKGGKGFSLLNKGGSLKGKDDNAPKSTKGRKVQFSYEGSNESRTGLSSKSGGKVETAI
PKGDWSKGGKGDKVAYGGKSPVSKEKRPLELKIEQELPTNAKCMFDCEATHILEGIQEQM
VVLSKDPTIKIPVSFDRGLQYAKSTSHFKNPLAVRPILEFLTDFGVSDGEICLISNMCPE
TIDEAFALVPSLKVLHAQIFIIMDTLYPPPPLLFKRQRGNMWLLGGSFLCEDKRILVAVP
LKDALSELSKLKQSK
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtctgaaaaaggaggaaaagggttttcactgttaaacaaaggagggtccttgaaagga
aaggatgacaatgcaccaaagtcaacaaagggaaggaaagttcaatttagttatgaaggt
tccaatgaatccagaacgggtttgtcatcaaaatctggtgggaaggttgaaactgcaatt
cctaaaggtgattggagcaaagggggaaaaggagacaaggttgcatatggtggaaagagt
cctgtgtcaaaagaaaagcgaccattggagcttaaaattgagcaggaacttcctacaaat
gccaaatgcatgttcgactgtgaggctacacacattttagaaggaattcaagagcagatg
gtcgtattatctaaagatccaacaatcaaaatccctgtatcatttgacaggggactgcag
tatgccaaaagcactagtcatttcaaaaatcctctggctgttagaccaatacttgagttt
ctcacagattttggtgtctctgatggggagatatgtctaatttctaatatgtgtccagag
actattgatgaagctttcgctctagtcccatcattgaaggtattgcatgcccaaatcttc
atcattatggacacactgtatcccccccccccccttctatttaaacgtcaaagagggaac
atgtggttgcttggtggaagttttctatgtgaggataagagaatcttagtagccgttccc
ctcaaagatgcacttagcgagctttcaaagctcaagcagtcaaagtaa

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