Quillaja saponaria (soapbark tree): O6P43_012267
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Entry
O6P43_012267 CDS
T09778
Name
(GenBank) Mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
O6P43_012267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_012267
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
O6P43_012267
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
KAJ7968121
UniProt:
A0AAD7M1A0
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All DBs
Position
5:5229419..5232728
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AA seq
317 aa
AA seq
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MVSYGGGGGFRGRGDGGGGFRGRGDGGRGRGRGFGGRGGDRGGSAFKPRGGGGGDRGRGG
RGGRGGRGGRGGGMKGGSRVVVEPHRHEGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ
TEDGTKVEYRIWNPFRSKLCAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTG
VVYAVEFSHRSGRDLVNMAKKRTNIIPIIEDARHPSRYRMLVGMVDVIFSDVAQPDQARI
LALNASFFLKAGGHFVISIKANCIDSTVPAAAVFQSEVKKLQADQFKPSEQVTLEPFERD
HACVVGGYRMPKKKKDA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggttagctacggtggtggtggaggattcaggggcaggggtgatggtggtggaggattc
agaggcaggggtgatggtggtagaggtagaggcaggggttttggaggaagaggaggagac
agaggaggtagtgcttttaaaccccgtggtggtggtggtggtgaccgtggccgcggaggc
cgaggtggtcgaggtggacgaggaggtcggggtggaggaatgaaaggtggaagcagagtt
gtagttgagcctcatagacatgaaggggtgttcattgccaagggtaaagaagatgctctt
gttactaagaatctggtccctggggaagctgtttacaatgagaagaggatttctgtgcag
actgaagatggtactaaagttgagtacaggatttggaaccctttccgttcaaagctatgt
gctgccattcttggtggggttgataacatatggattaaacctggtgctaaagtcctctac
cttggggctgcttctgggaccactgtctctcatgtatctgacattgttggcccgaccgga
gtggtctatgctgtagagttttctcataggagtggccgagacttggtcaacatggcaaag
aagcgaactaatattatacctattatcgaggatgctagacatccctccaggtatcggatg
ttggttggcatggtagatgtgatattttctgatgttgctcagcctgatcaggcaaggatt
ttggcattgaatgcgtcatttttcctgaaggctggaggtcattttgtaatttcaattaag
gcaaattgtatagactccactgtacctgctgcagcagtctttcagagtgaagtgaaaaag
ttacaagcagatcagtttaagcctagtgaacaagtaactcttgaaccattcgagcgagac
catgcttgtgttgttgggggataccgaatgccaaagaagaagaaagatgcttag
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