KEGG   Quillaja saponaria (soapbark tree): O6P43_012296
Entry
O6P43_012296      CDS       T09778                                 
Name
(GenBank) Wd40 repeat protein-u4/u6 small nuclear ribonucleoprotein prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_012296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_012296
Spliceosome [BR:qsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    O6P43_012296
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th PRP4 Beta-prop_EIPR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st WD_LRWD1 WD40_RFWD3 Beta-prop_RIG_2nd eIF2A Beta-prop_Vps41 Beta-prop_SCAP Nbas_N WD40_like
Other DBs
NCBI-ProteinID: KAJ7968151
UniProt: A0AAD7M1C6
LinkDB
Position
5
AA seq 574 aa
MTAEEDSTISVSLAESSISVSNGETLVSAVHPTPSQPVQPLIPPVVPSPVPPIAPVPTIQ
PPPVILPLAPIPVRPPVIRAPVLQNGDRRMSDSDSDHDDTLPTRSNQGTGEYEISEESKQ
VRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMA
KLDAEGQLEKLMKIHEEEEAAGIAREDADEETIQYPFYTEGSKALLDARIDIAKYSFSRA
ALRLQRARRKRDDPDEDMDAELDWALKQAGSLVLDCSEFGDDRALFGCSFSPDGNMLATC
SLSGVAKLWSMPQVKKASTLKGHTMHATDVAYSPVHNHIATASVDRTAKLWNAEGSLLKT
FEGHLDRLARIAFHPSGNYLGTASFDKTWRLWDLGTGEELLLQEGHSRKVYGIAFHHDGS
LAASCGMDALARVWDLRSGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRK
KKSLYVIPAHSKLISQVKFEPQEGYYLVTASYDMTAKVWSARDFKPVKTLSGHEGKVLSV
DITGDGRNIATVSHDRTIKLWSSSGNNEQAMDVD
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgacagctgaagaggacagcaccatatcggtttctcttgcagaatcctctatttcagtc
tccaatggtgaaaccctggtttctgctgttcatcctacaccgtctcaaccagtacaacct
ttgattccaccggtggttccgtctcctgtgcctcctattgctcctgttcctaccattcag
cctcccccagttatcctcccactggcacctattcctgtccgtccacctgttattagggca
cctgtgctgcaaaatggcgatagaagaatgagcgactctgattcagaccatgatgacaca
ttgcccaccaggagtaaccaaggcactggggaatatgagatatcggaagagagtaagcag
gtgagagaacggcaggaaaaagcaatgcaagaactcatgatgaagaggcgtgctgctgct
cttgcagttcctaccaatgacatggctgttcgagctcgtcttcgccgacttggtgagccc
ataaccctttttggtgaaagggagatggagagaagggacaggttgcggatgattatggca
aagctggatgctgaaggtcaattggaaaagctgatgaaaattcatgaggaggaagaggct
gcaggtattgcaagagaggatgctgacgaagaaacaattcaatatcccttttacacagaa
ggttcgaaagctctcttggatgctagaattgatatcgcaaagtattctttttctagagca
gctttgcgtcttcaacgtgcaaggagaaaaagggatgatccagatgaagatatggatgca
gagttggattgggctctgaagcaggctggtagtttggttcttgattgtagtgagtttgga
gatgatcgagcactttttggttgttccttctcaccagatggaaatatgcttgctacctgt
tctttaagtggagttgctaaactatggagcatgcctcaagttaaaaaggcttctacctta
aaggggcacaccatgcatgctactgatgtagcttattctcctgtgcacaaccatatagca
actgcctctgttgaccggactgcaaagttgtggaatgctgaaggatctctattgaagaca
tttgaaggtcatcttgaccgtcttgcacgcattgccttccatccatcagggaactacctg
ggcacagctagctttgacaagacatggcgattatgggacctagggacaggggaggagttg
cttcttcaagaaggccatagtaggaaagtatatggaatagcgtttcaccatgatggatca
ttagcagcatcttgtgggatggatgcactggctcgtgtttgggaccttcgtagtgggaga
agtattcttgctttggaaggccatgttaagccggttctgggcgtcagtttttcacctaat
ggttatcatttagccacaggtggtgaagacaacacatgccgcatttgggatttgaggaag
aagaaatctttgtatgtcattcctgcccactcaaaattgatatcgcaagtgaaatttgaa
cctcaagagggttactatttggtaactgcctcatatgacatgacagccaaggtttggtca
gcccgtgattttaagcctgtcaagacattatcaggtcacgaagggaaggttttgtctgtg
gatattactggagatggacgtaatattgccactgtctcccatgatcgcactataaagctg
tggtccagtagcgggaacaatgagcaagctatggatgttgactga

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