KEGG   Quillaja saponaria (soapbark tree): O6P43_012384
Entry
O6P43_012384      CDS       T09778                                 
Name
(GenBank) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_012384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_012384
   03036 Chromosome and associated proteins [BR:qsa03036]
    O6P43_012384
Spliceosome [BR:qsa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    O6P43_012384
 Complex B
    O6P43_012384
 Complex C
   U2 SnRNP specific factors
    O6P43_012384
Chromosome and associated proteins [BR:qsa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    O6P43_012384
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-ProteinID: KAJ7968251
UniProt: A0AAD7M220
LinkDB
Position
5
AA seq 1265 aa
MASMDPEIAKTQEERKKLEQQLASLTSVTFDTDLYGGSDKDAYLSSIPANEDEENLDSMD
NEVARKLASYTAPKSLLKEMPRGAEDDGDIGFRKPQRIIDREDDYRQRRLNRIISPERHD
PFSAGEKTPDPSVRTYADVMREEALKREKEDTLRLIAKKKKEEEEAAKAAPEKGKDSGAA
AAPQKRRNRWDQSQEDGGAKKAKTSDWDLPDTTPGRWDATPTPGRVADATPGRRNRWDET
PTPGRLADSDATPAGGATPGATPAGMTWDATPKLPGLATPTPKRQRSRWDETPVSMGSAT
PLPGATPAAAYTPGVTPVGGVELATPTPGAINMRGAITPEQYNLLRWEKDIEERNRPLTD
EELDAMFPQEGYKVLEPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEA
PGGLPFMKPEDYQYFGALLNEDDEEQLTPEEQKERKIMKLLLKVKNGTPPQRKTALRQLT
DKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALG
IPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQK
VRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEAL
YASYYTKEVMVVLIREFQSPDEEMKKIVLKVVKQCVSTEGVDAEYIRTDILPEFFKNFWV
RRMALDRRNYRQLVDTTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLG
ASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWR
LNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKS
IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRIC
FELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIV
AETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMD
RDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRV
ALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDEQNNVYSRPE
LMMFV
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggcgtcaatggacccagaaatagctaagactcaggaagagcgaaagaagttggaacag
caattggcttctcttacatcggtcacttttgatacggatctttatggtggaagtgacaaa
gatgcttatctgagttctattccagctaacgaggatgaagagaatttggattctatggat
aacgaggttgctaggaaactggcttcatatactgccccgaagtcgttgttaaaggagatg
ccaaggggtgcagaggacgatggtgatattgggtttaggaagccacagaggattattgat
cgtgaagatgattataggcaaaggaggttgaataggattatctctccggaaaggcacgac
ccattttcagcaggtgagaagacaccagacccatctgtgaggacttatgctgatgtaatg
agagaggaggcattgaagagggagaaagaggatactttaagattgattgctaagaaaaag
aaggaagaagaggaagctgctaaggctgcaccagagaagggtaaggattctggtgctgcc
gcagcacctcagaaaagaaggaataggtgggaccaatctcaggaagatggtggagcaaag
aaagctaaaacttctgattgggatttgccagatacaactccagggaggtgggatgcaaca
ccaactcctgggagagtggctgatgcaacacctggaaggaggaatagatgggatgaaact
cctacccctggaaggttagccgactcagatgctactccagctggtggtgcaacacccggt
gcaactcctgctgggatgacctgggatgctaccccaaagcttcctgggcttgctacacca
actccaaaaaggcagagatctcggtgggatgagacaccagtaagcatgggtagtgctaca
ccgctacctggtgccacacctgcagctgcatatacaccgggggttactcctgttggagga
gttgagctggctactccaacacctggagcaatcaatatgcgtggtgcaattacgcctgag
caatataatctgttgaggtgggagaaggacattgaggagagaaatcgtcctttgacagat
gaggagcttgatgcaatgtttccacaagaaggatataaggttttggaacctccagcctca
tatgtgcctattagaacacctgcaaggaagctgcttgcaaccccaactccactgggaact
cctttatatcaaataccagaagagaatcgtgggcaacagtttgatgttccaaaggaagca
cccggtggcttaccattcatgaagccagaggattaccagtactttggggcactgttgaat
gaagatgatgaagagcagttgacccccgaagaacaaaaagagcggaagattatgaagctt
ctgcttaaggttaagaatggtacaccaccacagagaaaaacagctctgagacagcttacg
gataaagctcgtgagtttggtgcaggccccttgtttaacagaattctgccattgctcatg
caacctactttggaagaccaagagaggcaccttttggtcaaggttattgatagagtactg
tataaattggatgagttggttcgtccatatgttcataagattcttgttgtgattgaacct
ttgttgattgatgaagattattatgcacgtgttgaggggagggaaatcatatctaatctc
agtaaggcagcaggattggcaacaatgattgctgccatgcgtcctgatattgacaacata
gatgaatatgttaggaacacaaccgccagagcattcagtgttgttgcctctgctcttgga
attcctgcactgttgccctttctgaaggctgtttgtcaaagtaagaaatcatggcaagct
cggcacacaggaattaagatcgttcagcagatagctattttgattggttgtgctgtactg
ccgcacctgaggtcccttgttgaaattatagaacatggtctaaatgatgagaatcaaaaa
gtgaggacgatcactgcattgtctcttgctgctcttgctgaggctgctgccccttatggt
attgaaagttttgattcggtcttgaagcctctgtggaagggtataagacaacatcgtggg
aaggtcttggctgccttcctgaaggccattggttttattattcctttgatggaagcttta
tatgccagttattatactaaggaagtcatggttgttttgattcgtgagtttcagtcacct
gatgaagaaatgaagaaaatagttctgaaagtggtgaaacaatgtgtaagtactgaggga
gttgatgctgagtacatcagaactgatattctccctgagtttttcaaaaacttctgggtt
aggaggatggctttggatcggaggaattataggcaacttgtagatacaactgtggagata
gcaaacaaagttggtgttgctgatatagttgggagaattgttgaagatcttaaagatgag
agtgaaccgtataggagaatggtaatggaaacaattgagaaggtggttacaaacttgggt
gcttctgatatagatgctcgattggaagagcttttgattgatgggattctctacgcattc
caagagcagacaagtgatgatgctaatgtgatgcttaatggttttggtgcagttgtgaac
tctcttgggcagagagtgaagccttaccttcctcagatttgtggtacgattaagtggagg
ttaaacaacaagagtgcaaaggtgagacagcaagcagcagatcttatttcaaggattgct
gtggtaatgaaacagtgccaagaggaacagctgatgggtcatcttggtgttgtcttgtac
gagtatctgggagaagaatatcctgaagttctgggatctattctgggagcactgaagtcc
attgtcaatgttattggtatgacaaagatgactcctcctattaaggatttgcttcccaga
ttgacaccaattctgaagaataggcatgagaaggtacaagagaactgtattgaccttgtt
ggtcgaattgctgaccgtggggctgagtttgtcccagctagggagtggatgaggatttgt
tttgagctccttgagatgcttaaggcccacaagaagggaatccgtcgagctacagtgaac
acctttgggtatattgctaaagccattggaccacaagatgtgctggcaactctgttgaac
aatcttaaagtgcaggagcggcagaaccgtgtctgcacaactgtggcaattgctatcgtt
gcagaaacctgttcacccttcacagttctgccagctttgatgaatgaatatcgtgtgcca
gagcttaatgtgcagaatggagtcttgaaatctctctctttcctttttgagtacattggt
gaaatgggcaaagactatatctatgctgtgactccgttacttgaggatgcactcatggac
agagatttggtacacaggcagactgctgcttctgctgtgaagcacatggctctgggagtg
gctggtttgggttgcgaggatgcattagtccacttgctgaactatgtgtggccaaatata
tttgagacttctcctcatgtcataaatgctgttatggaagctattgaagggatgagggtg
gcattgggtgctgccattgtgttaaactactgtcttcagggcctgtttcatcctgccagg
aaggttagggaagtgtactggaagatttataactcgctctacattggagctcaggatgct
cttgtggcggcttatcctattttggaggatgagcagaacaatgtatacagtagacctgag
ttaatgatgtttgtgtaa

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