Quillaja saponaria (soapbark tree): O6P43_012617
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Entry
O6P43_012617 CDS
T09778
Name
(GenBank) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsa01009
]
O6P43_012617
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_012617
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
O6P43_012617
Protein phosphatases and associated proteins [BR:
qsa01009
]
HAD phosphatases
Fcp/Scp phosphatases
O6P43_012617
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
O6P43_012617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-ProteinID:
KAJ7968525
UniProt:
A0AAD7M224
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All DBs
Position
5:7437333..7445911
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AA seq
912 aa
AA seq
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MYKSVVYQGEMLLGEVEIYPTQNKNIDVKEIRISHFSQPSERCPPLAVLHTITSSGVCFK
MESKTSQSQDTPLFLLHASCIMENKTAVMALGGEELHFVAMYSRSNDRQYPCFWVFSVAS
GLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSELDPQRISGMLAE
VKRYQDDKIILKQYAENDQVVENGKVIKVQSEIVPALSDNHQPIVRPLVRLQEKNIILTR
INPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDWNLI
NSKELLARIVCVKSGLRKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAP
YYAPQAEANSATPVLCVARNVACNVRGGFFKEFDETIILFQRMILLLPMETKIPVSFDGM
ADAEVERRLKDAISTSSVVPSTVTSLDPRFASSLQYTMASSSGSIPVPMPQAPVVPISNM
AVPQVVPQSAPLVKPFGQLAPAEPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTR
DHSSIEPSFPVRAPIQVSVPRLQSRGGWFPVEEDMSPQQLSRVVPPKEFPVDSEPLNIEK
HRPHHPSFFPKVESPISSDRILHENLRFPKECFVYGLLMLAWNFITLWFCYEVRKLQPGV
LQEIAMKCGSKVEFKPALVASTDLQFSIETWFAGEKIGEGMGRTRREAQHHAAEGSLKHL
ANIYMTHAKADSESTYGDVSRFANANDNGFGGHMNSFGNQMFPKEESVSFSASSEPSRLL
DPRLEGSKKSMGSITALKELCMMEGLGVSFQSQPPPISVNSAQNDEVHAQVEIDGQVFGK
GIGLTWDEAKMQAADKALGSLRSMLGQFTPKRQGSPRLQQGVSSKRLKQEFPRVLQRMPS
SARYAKNAPPVP
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtttatcaaggggagatgttattgggggaagttgagatataccca
acacagaacaagaacatcgatgtgaaggaaatcaggataagtcatttctcgcaaccgagt
gagaggtgtccaccacttgcagtgcttcataccattacctcaagtggtgtttgcttcaaa
atggagtcaaagacctcgcagtcacaggatacgccgctctttcttttgcatgcctcgtgt
atcatggagaacaagactgcagtaatggcactaggcggagaggagctacattttgttgct
atgtattcccggagtaatgacagacaatatccatgtttctgggtatttagtgttgcatca
ggactttataattcttgtcttgtgatgctaaatcttagatgtttgggaattgtatttgat
ctggatgaaacgcttatagtagcaaatacaatgcgttcttttgaggatagaattgaagcg
ctccagagaaaaataaacagtgaactagatccccaacgaatttctggtatgctggcagag
gtcaagcgctaccaagatgataagattatattgaagcaatatgctgaaaatgaccaggtt
gttgaaaatgggaaggtgataaaagttcaatccgagattgttccagcattatctgacaat
catcagcctatagtccggccacttgtacggttacaggagaaaaacattattttgactcgc
atcaatcctctgattcgtgatacaagtgttcttgtgaggctgagacctgcatgggaggat
cttcggagctatttgactgcaagagggagaaagcgttttgaggtctatgtttgcacaatg
gctgaaagggattatgcactagaaatgtggaggcttcttgacccagattggaatctgata
aactcaaaagaactcttagctcgtatcgtgtgtgtcaagtctggattaaggaagtcattg
ttcaatgtctttcaagatggcttatgccatcctaagatggcactggttattgatgatcgt
ttgaaagtgtgggatgagaaagatcaacctcgagtgcatgttgttcctgcatttgcccca
tattatgctcctcaagctgaggcaaatagtgctactcctgtcttgtgtgttgcaagaaat
gttgcttgcaatgtgaggggtggtttcttcaaagaattcgatgaaacaattatcttgttt
cagaggatgattcttctgctgccaatggaaacaaagatccctgtttcttttgatggcatg
gcggatgctgaggtagaaaggagattaaaggatgccatatcaacttcttcagtggttcct
tcaacagtcactagtctcgatcctagatttgcttcttctcttcaatacacaatggcatct
tcttctggctcgattccagtgccaatgcctcaagcacctgttgtgccaatttccaatatg
gcggtacctcaggtggtccctcagtcagctccattagttaaaccatttggccaacttgcc
cccgcagaaccaagcttgcatagttctcctgctagagaagagggtgaagtgcctgaatca
gaattagatcctgatactaggcgtaggcttctcattttgcaacatgggcaagatacaaga
gatcattcatcaattgaaccttcatttcctgtcagagctcccatacaagtttctgtcccc
cgtttgcagtcacgagggggatggtttcctgttgaggaagatatgagcccacagcaactg
agcagagtagtaccaccaaaagaatttccagttgattcagaaccattgaatatcgagaag
caccggcctcatcatccatcttttttccccaaggttgagagtcctatttcatctgataga
attcttcatgaaaatctgagatttccaaaagagtgttttgtgtatggtttactgatgtta
gcttggaattttattacattatggttctgttatgaagtgcggaaactccagcctggagtt
ttacaggaaattgcaatgaagtgtggaagcaaggtggagtttaagccagctttggttgct
agcacagacctacagttctccatcgagacttggtttgctggagagaaaattggtgaagga
atgggtagaactagaagggaagcacaacatcacgctgctgagggttctcttaaacacctg
gctaatatctatatgactcacgctaaggctgattctgagtctacatatggggatgtgagt
aggtttgctaatgcaaatgacaatggttttgggggtcacatgaattcttttggtaatcag
atgtttcccaaagaagagtctgtgtcattttcagcttcatcagaaccgtcaaggcttttg
gaccctaggttggaaggctccaaaaagtcaatgggttcaatcactgcccttaaagaatta
tgtatgatggagggtctaggtgtaagttttcaatctcagcctcctcctatttcggtaaat
tcggctcagaatgatgaagtacatgctcaggttgaaatagatgggcaggtatttggaaaa
gggattggattaacatgggatgaggctaaaatgcaggctgctgataaggcccttggaagt
ctgagatctatgcttggtcaattcactccaaaacgacagggttctccaaggttgcagcag
ggtgtgtcaagtaaacgcctgaagcaagaatttccacgggttttgcagcgaatgccctct
tctgcgagatatgccaagaatgctcctcctgttccttga
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