Quillaja saponaria (soapbark tree): O6P43_013272
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Entry
O6P43_013272 CDS
T09778
Name
(GenBank) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_013272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_013272
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_013272
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
O6P43_013272
Coactivators
SAGA/TFTC/STAGA complex
O6P43_013272
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
O6P43_013272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-ProteinID:
KAJ7969291
UniProt:
A0AAD7M3H2
LinkDB
All DBs
Position
5
Genome browser
AA seq
925 aa
AA seq
DB search
MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDLGGGHASTSQPSSDSDPVLPEGSSHTV
SPSLPHWPAGSQDEKTDYQLQDQKLMQQQEQSASEMGLKQDGDLVEQNQNVASQEVNNLS
LPQKQSQIDSHQGQGKQSSLQNLPTIGIQNSEKDHMPNHEPVRMHNTNSESQYLKLQKMS
NQQATVSEQAGSSINRTKQVPFGLLLPILQSQLDKDRAMQLHSLFLKLKKDEIPKEGFVR
LMKGLVGDQMLRLALSKVQSQQKPSAVGQHLLRTPSVNAGAAQLTDPHGFSQLHQRDLSS
PADPSHTPTSAVQVKSEATYPMIENNAKKSQGLDRKVEPHNLQQTQLQASRSNTKNQETE
RSSMGIQGLNKQQQQQQASAFPICVCKPQTNDSQLRQIPQHQSMGLNQLGGPTQGTNIMI
ERKTSISDPKRIQGGSVSSLLNSSASQQTLIPWQPSTNKEQNSGTLSSISYIKKEPSDQT
TEPQHKHQLSKFHGLPSISASQIEQGNAIPGTLSDEYLEKQSSRIGLPSPTSMSVTASTS
LIQPNTASSSVMAQLGPNTPLSSHVPPNTSPGIIGRPTPKKTSLGQKKPLEALGSSPPPP
NKKQKVSGASVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDNRFSEASRRAVQEEEER
LILQKAPLQKKLVEIMVKSGLKNISNDVERCLSLCVEERMRSLISSLIRLSKQRADSEKT
RHRTAVTSDVRQQIMIMNFKAREEWEKKQAEAEKLRKLSETESNTGVDGDNEKDEGRAKS
IKSNKEDDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQRQKREGGMDTASGSHPVKDVS
QKTLSTFGRNSKDNEAEKLDGAASISASAGTARKFGRNQGVPQTRVARSISVKDVIAVLE
REPQMSKSSLIYRLYERLHSGATAE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacccctccatagtaaagctccttgaagatgacgaggatgaaacaatgcattctggg
gcggatgtggaagcatttcaagctgccctgaacagagacttaggaggaggacatgcctct
acttctcagccttcttctgattcagatccagttttacctgaaggaagcagccatacagtt
agtccgtctttaccacactggccagctggtagccaagatgagaaaactgactatcaatta
caagaccaaaaacttatgcagcagcaagagcaatctgcatctgaaatgggtctaaagcaa
gatggagatcttgttgaacaaaatcagaatgttgcttcccaggaggttaataatttgtcc
ttgccacagaaacaatcccaaattgactcccaccaagggcagggtaaacaaagttccctc
cagaatcttccgactattgggattcagaactctgaaaaagatcatatgccaaatcatgag
ccagtccggatgcataatactaatagtgaatcccagtatttgaagttacagaagatgagt
aatcaacaggctacagtctctgagcaggcaggcagttcaattaatcgtactaaacaagta
ccctttggcctattgctgcctatcttacagagccaattggataaagacagagccatgcaa
cttcattctttatttcttaaactgaaaaaagatgaaattcccaaagaaggatttgtcagg
ctcatgaaaggtctcgtgggggatcagatgcttagattggcattatcgaaagtccaatca
cagcaaaaacccagtgcagtggggcaacaccttttgaggacgccatctgttaatgcaggc
gcagcacaattaactgatcctcatggcttttcacaacttcatcagagagatttgagctct
cctgcagacccatctcatacccccacttcagctgtccaagtgaagagtgaagcaacctat
ccaatgatagagaataatgctaaaaaatctcagggattggatcgtaaagttgaaccgcat
aacctgcaacagactcaattacaagcttcccgttccaatactaaaaatcaagaaaccgaa
agatcctcaatgggcatacaaggacttaataagcagcagcaacagcaacaagcatctgca
tttcccatctgtgtctgcaaaccacaaactaatgattcacaattgaggcaaattccacaa
catcaaagcatgggtttgaatcagttaggtggtccaacacagggcacgaatataatgatt
gaaaggaaaacttctatcagtgatccaaagagaattcagggtggttctgtctcttctcta
ttgaacagttcagcatcacaacaaactttaattccttggcaaccatcaacaaataaagaa
cagaattctggcactttgtcatctatttcttacataaaaaaagaaccaagcgatcagact
actgagccgcagcataagcatcagttgtctaaatttcatgggttgccttctatttctgct
tcacagattgaacagggtaatgcaattcctggaactttaagtgatgagtatttggagaag
cagtcttcaagaataggtcttccatcacctactagcatgtcggttacagcatctacaagc
ttgatacaaccaaatactgcttcttcttcagtgatggcgcaattgggcccaaataccccg
cttagctctcatgtaccaccaaacacttctccagggattattggaaggcccactcccaaa
aagacttctcttggccagaagaaacctcttgaagcacttggttcctcgccacctccacca
aataagaaacaaaaagtgtcaggggcttctgtggaacagagcattgaacagcttaatgat
gtcactgctgttagtggagttgatcttagggaggaggaagaacaactattttctgggcca
aaggaggacaatcgattttcagaagcatctaggagggctgtgcaagaagaagaagaaagg
ctgattttgcagaaagctccgttgcagaaaaaattggtcgagattatggtcaagagtggt
ttgaagaatataagtaatgatgtggagagatgcttgtcattgtgtgtggaagaaagaatg
cgttcactgataagtagtctaatcagactgtcaaaacagcgggctgattctgagaagaca
agacatcggactgctgttacctctgatgttcggcaacaaattatgataatgaatttcaaa
gctagggaagagtgggagaaaaaacaggcagaagcagagaagctccggaaacttagtgaa
actgagagtaataccggagttgatggcgacaatgagaaggatgaaggtcgtgctaaatca
attaagtcaaacaaagaagatgatgacaaaatgagaacaacagctgcaaatgttgctgca
cgagctgctgttggaggagatgacatgctatcaaaatggcaacttatggctgagcaacgg
caaaaacgtgaaggagggatggacacagcatctggttctcacccagttaaagatgtgagc
caaaagactttgtcaacatttggaagaaattcaaaggataatgaagcagagaaacttgat
ggcgcagcatctatttctgcatctgctggtactgctagaaagtttgggagaaatcaaggt
gtacctcaaaccagggtagctcgtagcatttctgtcaaggatgtgattgcagtcctggag
agggaacctcagatgtccaagtcttctctgatatatcgtttgtatgagagacttcattct
ggtgccacagcagaataa
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