Quillaja saponaria (soapbark tree): O6P43_013447
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Entry
O6P43_013447 CDS
T09778
Name
(GenBank) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_013447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_013447
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_013447
mRNA degradation factors
5'-3' decay
Decapping complex
O6P43_013447
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WDR54
Motif
Other DBs
NCBI-ProteinID:
KAJ7963498
UniProt:
A0AAD7LSP7
LinkDB
All DBs
Position
6
Genome browser
AA seq
1385 aa
AA seq
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MMSSGNPNQPTQTFDMQKFFKPTNQPPTPTSQNPLPFPPSSYPMAPSPPSPSSSSYPPPT
GTYSYPPQTAPFHHQYQHAHIPYSQDQVHSNLHQQRSLSFPTPPLQPQPMPPPHSMPPSP
SNPNAGARLMALLSSPAAANLDLPPQPTAPLHSIHPTSSGTPEFPVHTNIPVIPAMGMVS
GVNLGMAAPGPIRMPSSKLPRGRHLIGDHVVYDVNVRLQGEVQPQLEVTPITKYGSDPQL
VLGRQIAVNKSYICYGLKQGNIRILNINTALRSLLRGHTQRVTDLAFFAEDVHLLASAGI
DGRVYIWKISEGSDEEEKPQITGKIVVAIQLVGEEEATHPRICWHCHKLEVLVVGIGRHI
LKIDTTKVGKGEAYSAEEPLRCPIDKLVDGVQLVGRHDGEVTDLSMCQWMTTRLVSASLD
GMIKIWGDRKAQPLAVLRPHEGQPVYSARFFTASHRPDHIILITAGPLNREVKLWASESE
EGWLLPSDADSWKCNQTLDLKSSSEPQVEDAFFNQVAALSPAGLLLLANAKKNAIYAVHL
EYGPNPAATRMDYVAEFTVTMPILSFTGTSDVLPHGEHIIQVYCVQTQAIQQYALDLAQC
LPPPLENVGLEKSDSNVSHHATGAEELTSFDSASSAPKTNLQASSTEGAATVRYPVSSGP
IEATTSKEISSLNTEPKPVPLSPKLSRKLSDFRSPPPSFEQGLPLSDHGEDQSVNDHSAD
RQMDINHVNLSDIPPLNNDEKAAQDDTSSVLNPPVMFKHPTHLVTPSEIIKAGFSSETNV
IDSKSERETKIQDMLDMGNSEKEVKVVGETRSNQNDELQGESQLISDNKQKFFCSQASDL
GIEMARECCAISRETDAVEEPRRVDSSVVVPLAQPPNAGDDGVHVSAKDVSGRVSESATS
SMMAPQSPAPSTKGKRQKSKNYQALGPSSPSPSACNSTDSSNEPGGSLSLPSAETSFPQI
VAMQEMLNQLMTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKANTDALWARFQ
EENAKNEKSLRDRGQQITGLVNNLTNKDLPAMLEKIVKKEMAAVGPAVVRAITPAIEKTV
SSAIVESFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTGRQALQDSLKSSFETSV
IPAFEVSCKSMFEQVDTTFQKGMVEHTSAAQQHFESSHSPLAMALRDAINSASSITQTLT
GELVEGQRKLLALAAAGSNSSAVNPLVTQLSNGPLGGLHEKVDVPVDPTRDLARLISERK
YEEAFTIALQRSDVFIVSWLCSQIDLHGILSMVPLPLSQGVLLSLLQQLACDINKDRPRK
LTWMTDVAAAINPADPMISMHVRPIFDQVYQILNHQRTMPTITGAELSTIRLLMHVINSM
IMTCK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctggaaacccaaatcaaccaacgcaaacttttgacatgcagaaattcttt
aaacccacaaaccaaccgccaaccccgacctctcaaaaccctttaccattcccaccttcc
tcttatcctatggccccttctcctccgtctccttcttcttcatcttaccctccacccact
ggtacctattcatacccacctcaaacggcaccgttccaccaccagtaccaacatgcccat
atcccttactcacaggaccaggttcattctaacttgcaccaacagaggtccctctctttc
cccacacctcctcttcaaccgcagcccatgcctcctcctcactccatgcctccttctccc
agtaaccctaacgctggtgctcggttaatggctttgcttagttcgccggcagcagccaat
ctggatttgccacctcaacccaccgctcctttgcattcgattcatcctacttcatctggg
acgcctgaatttcctgtacacacaaatattccggtcattccggcaatgggtatggtatcg
ggcgtcaatctcggaatggctgccccaggcccaattcgtatgccgagcagtaagctccct
aggggtcggcatttgatcggtgatcatgttgtgtatgatgtgaatgttaggttgcaaggg
gaggtgcagcctcagcttgaagttactccgataacaaaatatggatcagatcctcagctt
gttttgggacgtcaaattgctgtcaataaatcgtatatatgctatggattgaaacaggga
aacattcgaatccttaatataaacactgcgttgagatctttgcttcgaggccacactcag
agggtcacggacctagctttctttgctgaagatgttcacctcttggctagtgctggcata
gatgggcgggtctacatatggaagatttctgaaggttcagatgaagaagagaaaccacaa
attactggaaagattgttgtcgctattcagttagtaggagaggaggaagctacacatcct
cgaatttgttggcactgccacaaactagaagttttggtggttgggattggaagacatatt
ctaaaaattgacactacgaaagttggcaagggggaagcttattcagctgaggaacctctt
aggtgtcccattgacaagcttgttgatggggtccaacttgttggtagacatgatggagag
gtgactgatctctcaatgtgccaatggatgaccacacgtttggtttctgcatcattggat
ggcatgataaagatctggggggatcgcaaggcgcaaccacttgcagtattgagaccacat
gaggggcagcctgtttattcagctagattttttactgcttcccatcggcctgatcatatc
atacttatcacagcaggaccactaaatcgagaagtgaaactttgggcctcagaaagcgaa
gaaggttggctgctaccaagtgatgcagactcatggaaatgcaaccagacattggacttg
aagagttcatctgaacctcaagttgaggatgcattctttaatcaagtggcagcattgtct
ccagcggggcttcttttactggcaaatgccaagaagaatgctatatatgctgtgcactta
gaatatggtcctaatccagccgcaactcgcatggattatgtagcagagttcactgtcact
atgcctattttgagttttacagggacaagtgatgtattacctcatggagaacatattatt
caggtttattgtgtccagacacaagctattcagcagtatgctttggacttagcccagtgc
ttgcctcctccacttgaaaatgtggggctagagaagtcagattctaatgtttcccatcat
gcaaccggtgctgaagaattaacttcttttgattcagctagttctgcacctaaaacaaat
ctacaagcaagtagcactgaaggtgcagctacagtaaggtatcctgtaagctctggtcct
attgaggctaccacttctaaagaaatcagctctctcaatactgagcctaaacctgttcct
ttgagtcctaagttgtccaggaaactttctgattttaggagtccaccacctagctttgag
caaggtctcccactcagcgatcatggtgaagaccaatctgttaacgatcattcagctgac
aggcaaatggatatcaatcatgtgaacttgtctgatataccacctctgaataatgatgag
aaggctgcacaggatgatacatctagtgttcttaatcctcctgtcatgtttaagcaccca
actcatctagttacaccatctgagataataaaagcaggtttttcatcagaaactaatgtg
attgacagcaagagtgagagagagacaaagatccaggatatgcttgacatgggaaattct
gaaaaagaagtgaaagtggtgggtgagacaaggtctaatcaaaatgatgaattgcaggga
gaatcacagctcatttcagataataaacagaaattcttctgctctcaggcttcagatctt
ggtattgagatggcccgagagtgctgtgcaatttcaagggaaactgatgctgttgaggaa
cctaggcgagttgattctagtgtagtggtaccactagctcaacctccaaatgctggtgat
gatggagtccatgtctctgcaaaagatgtttctggaagggtttctgagtcagctacatca
tccatgatggcaccacagtcacctgcacctagtacaaaagggaaaaggcagaaaagcaaa
aattatcaagcattgggtccatcttctccgtctccaagtgcttgcaattcaacagattct
tccaatgagccgggtggaagtttaagtctcccctctgccgaaacttcttttcctcaaatt
gtagccatgcaggagatgcttaatcagttaatgaccatgcaaaaggagatgcagaaacag
atgacaatgatggttgcagttccagttactaaagaaggtagaagactagaggctgcttta
ggtcgaagcatggaaaaagcagtcaaggctaatacagatgctctgtgggctcgttttcaa
gaagagaatgcaaaaaatgagaagtccttacgtgatcgtgggcaacagataacaggattg
gttaataacttaacaaacaaggacttaccagccatgctggagaagatagtgaagaaggaa
atggctgctgttgggccagctgtagtccgtgcaattactcctgccattgagaaaacagta
tcttcagccattgtggagtccttccagagaggagttggtgataaggcagtgaatcaacta
gataaatcagttaattcaaaacttgaagctactgttgctaggcaaatccaagcacaattt
caaactactggtagacaggcgcttcaggattctttgaagtccagttttgaaacttcagtg
atacctgcctttgaggtgtcatgcaaatctatgtttgagcaagttgatactacgtttcag
aaaggaatggttgaacatacatctgcagcccagcagcattttgagtcttcccattctcca
ttggcaatggcattaagggatgctattaattcagcatcatcaattacccaaaccctgaca
ggagaattggttgagggtcagcgaaagctgttggctcttgcagctgcaggttcaaactca
agtgcagtaaaccccttagttacccaactgagcaatggtcctttgggtggtctacatgag
aaggttgatgtgccagtggatccaacaagggatctagcaaggttgatatcagaacgaaaa
tatgaggaggcgttcactatagctctacaaagaagtgatgtattcatcgtatcctggttg
tgttctcagattgacctacatgggattttgtcaatggttcctctacctttgagccaaggt
gtactactctcgcttctgcagcagttagcatgtgatattaacaaagatagaccgagaaaa
cttacttggatgactgatgtggctgctgctataaatccagctgacccgatgatctcaatg
catgtgaggcccatcttcgatcaagtatatcagatactgaatcatcagcgcaccatgcct
acaataaccggtgctgagctctcaactattcgtcttctcatgcatgttatcaactctatg
ataatgacatgtaaatga
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