Quillaja saponaria (soapbark tree): O6P43_013742
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Entry
O6P43_013742 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_013742
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_013742
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_013742
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
O6P43_013742
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_013742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DAO_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
KAJ7963849
UniProt:
A0AAD7LT56
LinkDB
All DBs
Position
6:3851467..3861179
Genome browser
AA seq
747 aa
AA seq
DB search
MAPSFIFEAPSDEELEQLAAEDEEQEQSEAEEEEDEEEGGKAGASKKKTESPWDFAKYSE
SVAEEHARRSTTSIDFKISKALKERSVPIPKTTEDYSGGSDSDSEPDRQEDYRLDDEEDE
VGNVAESKSFFASSEGASFHANSFMELNLSRPLLRACEALGYTKPTPIQAACIPLALSGR
DICGSAITGSGKTAAFALPTLERLLFRPKRVPAIRVLILTPTRELAVQVHSMMEKIAQFT
DIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL
LELGFSAEIHELIRLCPKRRQTMLFSATMTEEVDELIKLSLSKPLRLSADPSTKRPATLT
EEVIRIRRMREINQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLRAAELHGN
LTQAQRLDALELFRKQEVEYLIATDVAARGLDIIGVRTVINFACPRDLTSYIHRVGRTAR
AGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSITKWSQLIEQMEDQVAEIFQE
EREEMALRKAEMEAMKAENMIAHKEEIYSRPKRTWFVTEKEKKLTAKAAKESVENEKKSG
KVVISAQQAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEGHVDKPKEISGKNKKE
KSGLSLVDLAYRRAKAVKAVTKALDAGKIVKKGKNKSDRPPRRTQSRTEEMQELFKSDMT
ERKPKSIRAGKKKPKSSFKSKSRYKRR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctccaagtttcatatttgaagctcccagtgacgaagagcttgaacaacttgcagct
gaagacgaagaacaagaacaaagtgaagctgaagaagaagaagacgaagaagaaggggga
aaggcaggagcttcaaagaaaaaaactgaatctccttgggacttcgctaagtactctgaa
tcagtagcagaagaacatgcccgtcgaagcacaacctctatcgatttcaaaatttccaaa
gccctgaaagaacgttccgtcccaatcccgaaaaccacagaagactacagtggcggctcc
gattctgattccgaacccgacagacaagaagattatagactggatgatgaagaagatgaa
gttggtaatgtagccgaaagcaagtctttttttgcatcatccgagggagcttcgtttcat
gccaattcattcatggagctcaatctgtctcgccctttgcttcgggcttgtgaggctttg
ggttacactaaaccaactcctattcaggcagcgtgtataccattggcattgtctggtcgt
gatatatgcggaagtgctattactgggtccggaaagacagctgcattcgcattacctaca
ttagagagattgttgttccgtccaaaacgtgtgccagctataagggtcctcattcttact
ccaactagagaattggcggtacaagttcacagcatgatggagaagattgctcagttcact
gatataagatgttgcctggttgttggaggtctttcaacaaaggtgcaagaggcagccctg
agatcaatgccagatattgttgtggccactccagggcgcatgatagatcatttacgaaat
tctatgtctgtggatttggatgatctagcagttctgatcctggatgaggcagatcgtctt
ttggagcttggatttagtgctgaaatacatgagcttattcgtctttgtcccaaaaggagg
cagactatgctattttcagcaacaatgactgaggaggttgatgagcttatcaagctttcc
ctgtcaaaacccttgcgtctctctgctgacccatccacaaaacggccagcaacgttgact
gaggaggtgattagaatacgccgaatgcgagaaataaatcaagaggcagttcttcttgca
ttgtgctccaagacttttacatctaaagtgatcatattcagtggaacaaagcaagctgca
cataggttgaagattatatttggattagcagggttgagagctgctgagcttcatggaaat
cttactcaagcacagcgtcttgatgccttggaactattcaggaagcaggaagttgaatat
ttgattgcaacagatgtggctgctcgtgggcttgatataattggtgttaggacagttatc
aactttgcatgtccacgtgaccttacaagctatattcatcgagtagggcgtacagcaaga
gctggtagagaaggatatgctgttacatttgtgactgataatgaccgttctcttttgaaa
gccattgcaaagagagctggttcaaagctgaaaagccggatagtagctgagcaatctata
actaagtggtctcaactaattgagcaaatggaggatcaagtagctgaaatttttcaagaa
gagagggaagagatggccctaagaaaagctgaaatggaagcaatgaaggcagaaaatatg
attgcacataaggaggagatttactcacgccccaaaagaacctggtttgtgacggaaaaa
gagaagaagcttacggctaaagcagcaaaggaatctgtagaaaatgaaaagaaatcagga
aaggtggtaatcagtgcccaacaagctgaagacctcaaaatgaaggaaaagaggaagaga
gagagagagaaaaatttgcctaggaagaagcgtagaaaattggaagcagctagagagatg
ttggaagatgaaggccatgtggacaagccaaaagaaattagtggcaaaaacaagaaggag
aagagtggattgtcccttgttgatctagcttaccggcgtgccaaagcagtgaaggctgtg
acgaaagcactagatgctggcaagattgtgaagaagggtaaaaacaaatctgatcgtcct
ccccgaagaacacagtcaaggacagaagagatgcaggagctatttaagagtgacatgact
gaaaggaagccaaaaagcatccgagcaggaaagaagaaacccaagagttcgtttaaaagc
aagtcaaggtacaagcgtaggtag
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