Quillaja saponaria (soapbark tree): O6P43_013743
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Entry
O6P43_013743 CDS
T09778
Name
(GenBank) putative Ccr4-associated factor
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_013743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_013743
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_013743
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_013743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-ProteinID:
KAJ7963850
UniProt:
A0AAD7LVK6
LinkDB
All DBs
Position
6:complement(3863429..3866799)
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AA seq
337 aa
AA seq
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MPQLKLLLGCQENRAEFQNENQTRACLCSVSMVTEKREQNHKCQSMIPNAKKPVIVREVW
AENLEQEFNLIRFVRPYYPVASLDTEFPGVIYLPNVDKPFYSEMSPSENYKIMKSNVDAL
NIIQVGLTLSDCHGNFPDFGTGTGFIWEFNFRDFSVEGDRQNPNSIELLRQQGIDFAKNR
DKGIDSNDFKMQILQSGLLFKTSSMSWVTFHSAYDFGYLIKILIRRELPPNIEAFMWLVE
FYFGPRVYDMKYMMKFCNGLYGGLDRVAKTLGVERVAGKSHQAGSDSLLTLQTFMKLLEN
FCLKENHGKRDWNLNEFEGFLYGLEAKEGDSFGYRVA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttaaaactcttgcttggttgccaagaaaaccgagcagaattccaaaacgaa
aatcaaactagggcatgcctctgttctgtttccatggttaccgaaaaaagagagcagaac
cacaagtgtcaatcaatgattcccaatgcgaagaagcctgtgattgttcgcgaggtctgg
gctgagaatctagaacaggaattcaacctgatccgatttgttcgtccttactacccagta
gcttcccttgacaccgagttccctggtgtgatctacctccccaatgtagacaaacctttc
tactcggagatgtctccttctgagaattacaaaatcatgaaatccaatgttgatgctctg
aacatcattcaagtcggcctcacactatctgattgccatggaaattttcctgattttgga
acaggaactgggtttatctgggaattcaatttcagggatttttctgtggaaggcgaccgc
caaaaccctaactcaattgagttactccgtcagcagggaattgattttgcaaagaacaga
gataagggtattgattctaatgattttaagatgcagattttgcagtctgggttgctcttc
aagacatcatctatgtcatgggttactttccatagtgcttatgattttggatacttgatc
aaaattctgatccgcagagaattgccccctaacattgaagctttcatgtggctggtggag
ttttactttgggccaagagtgtatgacatgaagtatatgatgaagttctgcaacggattg
tatggtggcttggacagggtggctaagacattgggggttgagcgtgtagctgggaagagt
caccaggctggttcagatagtttgttgacattgcagacttttatgaagcttctggagaac
ttttgtctcaaggaaaaccatggaaagagggattggaatttgaatgagtttgaaggattt
ctgtatggattagaagcaaaggaaggggacagctttggatatagagttgcataa
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