Quillaja saponaria (soapbark tree): O6P43_014125
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Entry
O6P43_014125 CDS
T09778
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsa03016
]
O6P43_014125
Enzymes [BR:
qsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
O6P43_014125
Transfer RNA biogenesis [BR:
qsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O6P43_014125
Prokaryotic type
O6P43_014125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
KAJ7964283
UniProt:
A0AAD7LU27
LinkDB
All DBs
Position
6
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AA seq
525 aa
AA seq
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MAVPSLQFPLSPCITKNPNPSVLITNPIIPSTLLSCSSSSTQTLTQSPPNHSSFLSHDKW
EPFLKRKVVMRVGYVGANYRGLQMQRDEHFLSTIEKELETAIFNAGGILDCNFGDLQKIG
WGRSSRTDKGVHSLATMITLKMEIPENAWKGDTYGIALANRINSYLPCDIRVFSILPSHK
RFDPRRECNLRKYSYLLPADIIGIRSHFSKEEIDYHISDFNNILSSFEGEHPFHNYTIRS
KYRKHFSARQSPGNSGISRRIKSSSLASKSESECGESNGGEPYFESDEAIISSDKGQNQK
FLESNISHGHAVSTCNKHGNDLKDQTSSLVVHARWLYEPDETDRISGSHFRKILSCSCGK
LENSLGYDYVELNIWGESFMLHQIRKMVGTAVAVKRELLPRDILTLSLVKFSRIILPLAP
PEVLILTGNSFTMRSQPRNVTRPEMLTMVESEEIQKEVDEFYISVMLPQVSKFLDPSKSP
WTEWVENLDRNTSIPDSQLDEVRNAWKTWKNKFEMKSCAGSVVHD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcccttctctccaattcccactctccccgtgtatcacaaaaaacccaaacccc
agtgttttaataacaaacccaattattccttcaacactgttaagctgctcgtcttcttct
actcaaaccttaacccaatccccaccaaaccactcgtcctttctctcccacgacaaatgg
gaacctttcctaaagagaaaggtcgttatgcgggttggatacgtcggcgccaattacaga
ggtctgcaaatgcaacgtgatgagcatttcctatcgactattgagaaagaactggaaact
gccatcttcaatgctggtggtatccttgattgtaattttggggatttgcaaaaaattgga
tggggcagaagtagcagaactgataaaggagtccactctctggcaacaatgataacctta
aaaatggaaatccctgagaatgcatggaaaggagacacttacggaattgctcttgcaaat
cgcatcaattcttatcttccctgtgatattagagtctttagtattcttccttcacacaag
aggtttgatcctagaagagaatgcaatcttcggaaatattcttatctcctccctgctgat
attattggaatccggagtcattttagcaaggaagaaattgattatcatatctcagacttc
aacaatatactctcttcttttgagggagaacatcctttccataattatacgattcggtcc
aagtacaggaagcatttctctgcaaggcaatcacctggaaatagtggcatatcaagaaga
ataaaatcatctagtttggcatcaaaatctgagtcagagtgtggagaaagtaacggagga
gaaccatattttgaaagtgatgaagcaattatatcaagtgacaagggacagaaccagaag
ttcttggaatctaacatttctcatggacacgcagtttcaacttgcaataaacatggaaat
gatttaaaggatcaaacctctagtttagttgttcatgcaaggtggttgtatgaacctgat
gagacagatagaataagtggttcccattttagaaagatcttatcctgttcttgtggaaag
ctagaaaattcgcttggatatgattatgttgagctcaatatatggggagagtccttcatg
ttacatcaaatacgcaagatggttgggactgctgtggcagtaaagcgcgagttactcccg
agagacattctgacattgtcactggtcaagttctcaagaattattctaccccttgctcca
ccagaagttctaattctgacgggaaatagttttacaatgaggtcacaaccaagaaatgta
acaaggcctgaaatgttgactatggttgaatctgaagaaattcaaaaggaagttgatgag
ttctatatatctgttatgctgcctcaagtttcaaagtttctggatccgtcgaaatctcct
tggacagaatgggttgaaaatttggataggaacactagcattccagattctcagttggat
gaagtcaggaatgcttggaaaacatggaagaataagtttgagatgaaaagctgcgctggg
tcagtagtacatgattga
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