Quillaja saponaria (soapbark tree): O6P43_014185
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Entry
O6P43_014185 CDS
T09778
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_014185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_014185
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_014185
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O6P43_014185
Messenger RNA biogenesis [BR:
qsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O6P43_014185
DNA repair and recombination proteins [BR:
qsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O6P43_014185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7964352
UniProt:
A0AAD7LUL4
LinkDB
All DBs
Position
6
Genome browser
AA seq
821 aa
AA seq
DB search
MESILKRYFGFSTFRPYQKEVIEKILEKRDCLVVMATGSGKSLCYQIPPLVVGKTGVVVS
PLISLMQDQVMTLKQRGIRAEYLGSTQTDQTVQTKAEKGQFNILYMTPEKACLIPTSFWV
EYKQLDKLRDILIDVPFIGLTATATEKVRADIIISVKMNDPYVSIGSFDRNNLFYGVKSF
NRGSIFLDELVQEVSNFVARSGSTIIYCTTIKDVEQISRSLQEAGIRAGIYHGQMDKRAR
EESHRLFVRDELQVMVATVAFGMGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIASV
CWLYYTRSDFAKGDFYCGESQNAKQRRAVLESLMAAQRYCLLTTCRRKFLLEHFGEKLSA
DRCGNFLRGSRSKKILDAQFDKLPLHGLGKAYSSNWWKALAHQLISYGYLKEIVSDGYRT
ISVSPKGEGFLASAMPDCQPPLVLSVTSEMIDEEVEEPKSTPAAAGDFKSLATSEFEGFS
EAEVQLYQMLLEERLKIARCIGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQHLLV
MHGDHFVQIILTLSQRLNLSLDGEASLQTAAVGRVSPLTNQPKKLTPAKFEAWKMWHKDG
LSIEMIANFPGRSAPIKEQSVGEYLLEAAQEGLPFDWNRYCDMIGLTCEIFSEIQGAISK
VGSTEKLKPIKNEVPEDISYLHIKSCLAMQNSGVSPEAILPSRHQNGKDGELPSDTSERN
DKTTSEPNTGGQKQMLHSVSEEDQLSKKRLKVGQPGEGNPVNLEATGSSMVDWLKNYEEG
VTLFNIREHFNGSSEESLVEILNGLEGDFLIYIKNNVYKLL
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggagtccattctcaagagatacttcggattttctacattccggccatatcaaaaggag
gttatagagaaaattcttgagaaaagggattgcttggttgttatggctactggtagtggg
aagtcattgtgctatcagataccccctttggtcgttggaaagactggggtagttgtaagc
cctctgatttcgttaatgcaagatcaggtaatgactttaaaacaacggggcattagagct
gagtatcttggaagtactcagacggatcaaactgttcagactaaagctgagaagggtcaa
tttaatattttatacatgactcctgagaaggcatgcttgattcctacaagcttctgggtt
gaatataagcagttagacaagttacgtgatattctcattgatgttccttttattggccta
actgcaactgcgactgaaaaggttcgagctgacatcatcatttccgtgaagatgaatgat
ccttatgtttccattggctcatttgatcgaaataatctcttttatggtgtcaagtcattt
aatcgtggatcaatttttttggatgagctcgtacaagaagtttcaaactttgttgctaga
agtggctcaactataatttactgcacaacaattaaagatgtagaacagatatccagatca
cttcaggaagcaggaattagggctggaatctatcatggtcaaatggataaaagagctcgt
gaggagtctcacagattatttgtaagagatgagctgcaagtcatggttgccactgttgct
tttggcatgggtattgataagcctaacataaggcaagtgatacactatggttgccctaaa
agtcttgagtcctattaccaggaaagtggacgatgtggtagagatggtatagcttctgtc
tgctggctttattatacaagaagtgactttgcaaagggtgacttttactgtggagaatca
caaaatgcaaagcaaagaagagctgttctggagtcattgatggctgcccaacgctattgc
ttgctgacaacttgtagaaggaagttcctgcttgaacatttcggggaaaaattatcagct
gatagatgtgggaattttcttcgtgggtcacgatccaaaaaaattctggatgctcagttt
gacaaacttccacttcatggacttgggaaagcttactcatcaaattggtggaaagcacta
gcgcatcaattaatttcttatggttatttgaaggagattgtaagtgatgggtacagaact
ataagtgtcagtccaaaaggagaggggtttctggcttctgctatgcctgattgtcaaccg
cccttagttttgtcagtgactagtgaaatgattgatgaagaggtagaggaaccaaaaagc
accccagctgcagctggagacttcaaaagtttggctacttcagaatttgaggggttctca
gaggctgaggtgcaactgtaccagatgcttttggaagagagattgaagattgcaagatgc
attggaactgctccatatgctatatgtggtgatcaaactatcaagaaaattgcattgaca
agaccgtctaccaaagcaaggcttgcgaatattgatggtgtgaaccagcatctactagtg
atgcatggagatcatttcgttcaaattatactgactctatcacaaagattaaacctttca
ttggatggggaagcgagtttacaaactgctgcagtaggaagggtgtctcctttaaccaac
caaccaaagaagttgacaccagcaaagtttgaagcttggaaaatgtggcataaagatggc
ctttctattgagatgattgctaacttccctggtagatcagctcctataaaagaacaatct
gtcggtgaatatctcttggaggctgcccaagaaggattgccttttgattggaatagatac
tgtgacatgattggactgacgtgtgagatattctcggaaattcagggtgcaatttcgaag
gttggctctacagaaaagttgaagcctattaaaaatgaagtacctgaagatataagttat
ctgcatatcaagagttgtctggctatgcaaaactctggagtatctccagaggccattcta
cccagccgccaccagaatggaaaagatggtgaacttccaagtgatacatctgaaagaaat
gataaaacaacttctgaacctaacactgggggacagaagcagatgctacattcagtcagt
gaagaggatcaactgtcgaagaaacgcctaaaagttggtcaaccaggggaaggaaatcca
gtaaacttagaagcaacagggagttccatggtagactggctgaagaactatgaggaaggg
gttacgctctttaatattagggagcacttcaatggatccagtgaagagtctctggtggaa
atactgaatggccttgaaggtgactttttgatatatataaaaaataatgtatacaagctt
ttgtaa
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