Quillaja saponaria (soapbark tree): O6P43_014511
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Entry
O6P43_014511 CDS
T09778
Name
(GenBank) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_014511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_014511
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_014511
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
O6P43_014511
Coactivators
SAGA/TFTC/STAGA complex
O6P43_014511
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
O6P43_014511
STAGA complex
O6P43_014511
TFTC complex
O6P43_014511
SAGA complex
O6P43_014511
SLIK complex
O6P43_014511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-ProteinID:
KAJ7964752
UniProt:
A0AAD7PRE8
LinkDB
All DBs
Position
6
Genome browser
AA seq
545 aa
AA seq
DB search
MSIVPKETIEVIAQCIGINNLSPDVALALAPDVEYRMREIMQEAIKCMRHSKRTMLTADD
VDGALNLRNVEPIYGFASGGPLRFRRAVGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTSV
LCHWLAIEGVQPAIPENAPVEVISAPSGGNKYEQKDDRLPIDIKLPVKHVLSRELQLYFD
KITELAISRSDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLSNYGLLLALMRLV
HSLLLNPHLHVEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFSANLVASICKRFGHV
YSNLQTRLTKTLLNAFLDPKKALTQHYGAIQGLAALGHNVVRLLVLPNVEPYMRLLEPEM
TVEKQKNEMKRHEAWRAYGALLHAAGQCVYDRLKMFPPLPSPSPYAVWRTSARVLAALPH
KRKERLEQVEEQPPLKKIATDGTVGLVLTNSSASHSQGEAVIPAISVNSIPGPSSSSSGE
MPNNTIIDGRVRTDKSDGKATKTSAVLNQVWKEELNSGRLLISLFEVFGEGILPFFPAPE
MSLFL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtgcccaaagagactattgaggtcattgcacaatgtattgggattaacaac
ttgtctccagatgttgctcttgctcttgcgcctgatgtggaatatcgtatgcgcgagatt
atgcaggaggcaatcaaatgcatgcgtcattctaagaggacaatgctgacagcagatgat
gtggatggtgctctcaacttgagaaatgttgagccaatatatggctttgcctctggcggt
cctttacggttcagaagagctgttggacacagggacttgttctacattgatgacaaggac
gtggacttcaaagatgtgattgaagctccgttgccaaaagcaccacttgatacttcagtt
ctttgtcattggcttgctatagaaggcgttcaacctgctattccagaaaatgctcctgta
gaagtaatttcagctccttctggtggcaacaagtatgaacagaaagatgatagacttccc
attgacatcaagttaccggttaagcacgtattgtctagggagcttcagctgtactttgat
aaaatcaccgagcttgctataagtaggtctgattcagttctctttaaagaagcactagta
agcttggccactgattcgggacttcatccattagttccttatttcacatgctttatagct
gatgaggtttctcgtggtctaagtaactatggtcttctgcttgctttaatgcgtcttgtc
catagccttctcctgaatcctcatctccatgtggaaccttatctgcatcaattaatgccg
tctgtggtcacttgccttgttgcaaaacggttggggaataggttggcggacaaccattgg
gaacttagagacttttcagcaaacctggttgcttcaatatgcaaaagatttgggcatgtc
tatagtaatctccaaacccgtttgacaaaaacgttgctgaatgcattcttggaccccaag
aaggctctcactcaacactatggtgcgattcaagggttagcagccctaggacacaatgtg
gtccgccttcttgtactgccaaatgttgagccatatatgcgacttcttgaaccagagatg
actgttgagaagcaaaagaatgagatgaagaggcatgaagcttggcgtgcttatggggcc
ttgctgcatgctgcaggtcaatgtgtatatgatagactcaagatgttccctcctttgcca
tctccatcaccttatgctgtctggaggaccagtgcacgagttcttgctgctttgcctcat
aaacgtaaggaaaggctggagcaagtggaagagcagccacctcttaaaaaaattgcaact
gatggcacagttggtttagtgttgacaaattcctccgcatctcatagccaaggagaagca
gttattccagctatttctgtcaattcaattccaggtccatcttcttcatcttctggagaa
atgcctaataataccattattgatggaagagttagaactgataagagtgatggtaaagca
acaaagacgtctgctgtccttaaccaggtatggaaggaagaattaaattctggacggcta
ctgatatcactgtttgaggtgtttggtgaaggcattctacccttctttccagctcctgag
atgtcattattcttgtga
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