Quillaja saponaria (soapbark tree): O6P43_014748
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Entry
O6P43_014748 CDS
T09778
Name
(GenBank) DExH-box ATP-dependent RNA helicase
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_014748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_014748
03012 Translation factors [BR:
qsa03012
]
O6P43_014748
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O6P43_014748
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
O6P43_014748
Translation factors [BR:
qsa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
O6P43_014748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
Helicase_C
HA2_C
DEAD
OB_NTP_bind
Ank_2
HA2_N
ATPase
nSTAND3
Ank_5
AAA_22
AAA_23
AAA_16
AAA_19
AAA_7
Rad17
NACHT
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
KAJ7965034
UniProt:
A0AAD7LVE5
LinkDB
All DBs
Position
6
Genome browser
AA seq
1269 aa
AA seq
DB search
MGKKNGKKAWLAKKRQAQMAQNPSVDEATKNQTSIPKRQNFSVDEATKTGTARQNRQNGS
VDESAMIRISKLLDEFRATKDKVYTFEPNLSKNERAIVHQLCRKMGMESKSSGRGNQRRI
SVYKNKRKVGSDKGLESLPCLRFSEETKEVLMDLFIQYPPGDGDLEEELVGENSDNAEQR
KRKKDDFFCKPLMNKEDIANKLEKLASAMEKAPGLTKKKPKLPIASFKDIITSTIDSHQV
VLISGETGCGKTTQVPQFILDHIWGKGDSCKIICSQPRRISATSVAERIASERGENVGEN
VGYKIRLESKGGRHSSILLCTNGVLLRVLVSKNADKPKKEGMRVDDYSGITHIVMDEIHE
RDRYSDFMMAIIRDMLPSYPHLHLILMSATIDAERFSHYFGGCPVINVPGFTYPVRTFYL
EDVLSIVKSTEDNHLDNTLLSALTDNRELDEEDKFALDEAINLASNNDELDSLLELVSTE
GSPKLYNYQHRSTGLTPLMVFVAKGRVGDICMLLSLGADCHLRAKDGTTALEIALRENQQ
EAAEILKKHMGNDSSNSMGEQKLLDKYLATVNPELVDVVLIEKLLRKICTISKDGGVLVF
LPGWDDINKTRDKLLASPFFKDTSKFIILSLHSMVPSMEQKKVFKHPPPGYRKIILSTNI
AETAITIDDVVYVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGRCQPGICYH
LYSKIRASSIPDFQIPEIKRMPIEELCLQVKLLDPSCKIEDFLRKTLDPPISETIHNAII
VLQDIGALSLDEKLTQLGEKLGALPVHPLTSKMLFFAILMNCLDPALTIACASEYRDPFT
LPMLPVEKKKAAAAKLELASLYGGRGDQLAVVAAFDSWKNAKARGEQARFCSQYFVSSST
MSMLSGMRMQLQKELIRTGFILQDVSSYNSNAHDTGILHAVLVAGLYPNVGRLSPPNKSG
KKFMVETASGDKIRLHSHSTNYMLSFGKTDDRPLIVYDEVTRGDGGMNIRNCTLVGALPL
LLLSTEIAVASAKEDDDDNENDDADNGGSDDGDGESQDGMEIDNTSGGHSEEKLMSSPDN
SVRVVVDRWLYFRSTALDVAQIYCLRERLSVAMLYKVKHAGKVLPPVLGDSLHAIACILS
YDGLFGIPNTLECVDSLASMEIATDYDNSLMETRKVIGQKGNKFPVPLVGKRYNNTKSFS
SQQVSRVPVSMGTNNLSSPSSHNVPPMLGSAWSNQNQNRPSEGPGLNGNMGENVPRHRQR
KRNRGNLFS
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaatgggaagaaagcttggctcgcgaagaagcgccaggcacagatggct
cagaaccctagtgttgatgaagccacaaaaaatcaaacatccataccaaaacgccaaaac
tttagtgttgacgaagccacaaaaactggaacagccagacaaaatcgccagaatggtagc
gttgacgaatccgcaatgattagaatatcgaaactgctggacgagttccgagctacaaaa
gataaagtgtacacatttgaacctaacctatccaagaatgaacgggctatagtgcaccaa
ctatgcaggaaaatgggtatggaatccaaaagttctgggcgtgggaaccagcggcgtata
tctgtttacaaaaataagaggaaggttggctccgataaggggttagaaagtcttccttgt
ctcagattttcagaggagacaaaagaagtcttaatggatttgtttatacaatacccacct
ggtgatggagacctggaggaggaattggtaggggaaaatagtgacaatgcagaacaacga
aaaagaaaaaaagatgattttttctgcaagcccttaatgaacaaagaagatattgccaat
aaattggaaaagcttgcttctgcaatggagaaggcccccggtctcactaaaaagaagcca
aagcttccgattgcatccttcaaggatatcatcacttcaacaattgattcccaccaggta
gttctcatatctggtgagactggttgtggaaagaccacccaggttccacaattcattttg
gatcatatctggggtaagggtgactcatgtaaaataatttgcagtcagcctcggcgtata
tctgcaacatcagtcgctgagagaatagccagtgaaagaggggagaatgttggagaaaac
gttggatacaagatacggctggagagtaaaggtgggaggcattcatcaattctgctctgc
actaatggagttctgttgagggtgttggtttctaaaaatgctgataagccaaagaaagaa
ggcatgagggttgatgattattctggcattacgcacatagttatggatgaaattcatgaa
cgagaccggtattctgatttcatgatggcaattatcagagacatgcttccttcatatcca
caccttcatctgatactaatgagtgccactattgacgctgaacggttttcgcactatttc
ggtggctgcccagttatcaacgtcccggggttcacatatcctgtcagaactttctacttg
gaggatgtactttctatagtgaaatctactgaagataatcatcttgataatactctatta
agtgccctgactgacaaccgtgagttagacgaggaagataagtttgctttagatgaagct
attaatttggcttctaataatgatgagttggattccctcttagaattggtttctactgaa
ggatcccctaaactctataattaccagcatcggtcgactggccttacaccgctgatggtg
tttgtggcaaagggaagagtgggtgatatatgcatgctcctatctcttggagcagattgc
catttacgtgccaaagatggaacaactgcgctagaaatcgctttgcgtgaaaaccagcaa
gaagctgctgaaatattgaaaaagcacatgggaaatgattcttccaactccatgggagaa
cagaagttacttgataagtacctagcaacagtcaatcctgaacttgttgatgttgttctg
atagagaagctattgaggaaaatatgtactatttccaaagacggaggcgtccttgttttt
cttcccggatgggatgatataaataaaactcgtgacaaactattagcatcccctttcttc
aaagatacttcgaagttcatcatattatctctgcattctatggttccatctatggagcaa
aagaaggtttttaaacacccgcctcctggatatcgcaaaattattctttcgactaatatt
gctgaaactgccattacgattgatgatgttgtttatgtcattgacactggacggatgaaa
gaaaaaagttatgatccttacaataatgtatcaactcttcaatcttcttggatttcaaaa
gcaagtgccaagcagcgagagggacgtgcaggccgctgtcaacctggaatttgttatcat
ctttattcaaaaattcgggcttcttctattccagattttcaaattcctgaaattaagaga
atgcctattgaggagctttgcctacaggtgaagttactggatccaagctgcaaaatagaa
gattttttgagaaagacactggatcctccgatttctgagaccatacataatgctattata
gttcttcaagatataggggcattgtcacttgatgaaaaactaacacaacttggggagaag
ttgggtgctcttcctgttcatccactgacaagcaagatgcttttttttgctatattgatg
aactgccttgacccagcattgactatagcatgtgcctccgagtatagagatccatttact
cttcccatgctaccagttgaaaagaagaaagccgctgctgccaaacttgagcttgcttca
ttgtatggggggcggggcgatcagttagcagtggtagcagcatttgacagctggaagaat
gcaaaggctaggggtgaacaggcacgattctgttctcaatactttgtctcttcaagcacc
atgagtatgttgtctggcatgcgaatgcaacttcaaaaagaactaattcggactggattt
attcttcaagatgtttcaagttataactcaaatgcacatgacactggtatacttcacgct
gtcctcgtggctggtttgtatccaaatgtcgggagattgtctccacccaataaaagcgga
aaaaagttcatggtggagacagcaagtggtgacaaaattcgcttgcactctcattcaaca
aattatatgttgtcatttgggaaaacagatgatcgccctttaattgtatatgatgaggtt
actcgtggtgatgggggtatgaacataaggaattgtactcttgttggggcacttccacta
ttactgctttcaaccgagattgctgttgcttcagcaaaggaggacgatgacgataacgag
aatgatgatgccgacaatggtgggagtgatgatggtgatggtgaaagtcaagatggcatg
gagattgataatacttctggtggacatagtgaagagaaattgatgtcctctcctgataat
tcagttagagttgtcgtggaccggtggctttattttaggtcaacagcgcttgatgttgct
cagatatactgcttgagggagcgattatctgtggcaatgttatacaaggtaaaacatgcc
gggaaagttctcccacctgttcttggggactctctgcatgctatagcttgtattttatct
tatgacgggctgtttggaataccaaacactctagaatgtgtagactcactagcttcaatg
gaaattgcaactgattatgacaattcattgatggagacaaggaaagttattggtcagaag
ggtaacaaattccctgtacctcttgtgggcaagaggtataataacacgaagagtttcagt
tctcaacaggtaagtagagtaccggtatctatgggaacaaataatttaagttccccgtca
agtcataatgttccaccaatgcttggttcagcttggtcaaaccaaaaccagaaccgtcct
tcagaaggccccggtttaaatggtaatatgggtgagaatgtaccacgacaccggcagagg
aagcgaaatcgtgggaatttgttcagctaa
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