Quillaja saponaria (soapbark tree): O6P43_015039
Help
Entry
O6P43_015039 CDS
T09778
Name
(GenBank) RNA polymerase sigma factor
KO
K03093
RNA polymerase sigma-I factor
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_015039
Transcription machinery [BR:
qsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O6P43_015039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-ProteinID:
KAJ7965389
UniProt:
A0AAD7LW57
LinkDB
All DBs
Position
6
Genome browser
AA seq
510 aa
AA seq
DB search
MGVVAVSSSVARTPLGLNAKFSTHRTTPQNPLIIAFKGDKSNNTVTAAPQVLIETTKKHQ
ERAGKTKRLPKRVKAVCAEEASPCTLEVDYNEAAAKLETIYKLTADTIDVKDQDVVIRRS
RRRRKRIGEVGNKGISEDNVIRNHNKKAKRLNLDKRIALKMNKEEVMTPAWKKRNGKNEF
EKIEELVREYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAVLQLKENLQGQLE
REPSEGELADATNMSIVQVKRQLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQD
LCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSLTISSFLRVSFGLESVRVEIQ
KAKLELTFELHRLPTEEEIIERVGISPERYHEVIRASKSVLSLHSRHATTQEEFIDGITD
VDGVDGVNGDNRRQPAILRLALDDVLDSLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNI
SREMVRKHEVKALMKLKHPARVDYLRPYVV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtggctgtatctagctcagtagctcggaccccactaggattaaatgcgaaa
ttctcaacgcaccgaactacgccccaaaaccccctgattatagcatttaaaggagataaa
tccaataatacagttactgctgccccccaggtactgattgaaacaactaagaagcaccag
gagagagcagggaaaactaaaagactaccaaaaagagtgaaagctgtatgcgctgaagaa
gcttctccatgtaccttggaggtggattacaatgaagctgctgccaaacttgaaaccatc
tataagcttacagctgacactattgatgtgaaagatcaagatgttgttatcagaagaagc
aggcgaaggaggaaaaggattggtgaagttggcaacaaagggataagtgaagataatgtg
atcagaaaccacaataagaaggctaaacgattgaatcttgacaagaggattgcactaaaa
atgaacaaggaggaagtaatgactccagcttggaagaaaagaaatggtaagaatgaattt
gaaaaaattgaggagcttgtgagggaatattcagcttcaaccgatttggttagtctggat
tggaaaaaaatgaagatacctccagttcttccttcctcggagcatgcttggttgttcaag
ttgatgcaacctatgaaggcagttcttcaactgaaagagaatttacaaggacaattagag
agagaaccttcagagggtgaactggctgatgcaacaaatatgagcatcgttcaagttaaa
agacaattagaggtcggccgcgctgcaagaaataagctcattaagcacaatctccggctt
gttttatttgtgatcaacaaatattttcaagacttcgcaaatggcccaaagttccaagat
ctctgtcaggcaggagtaaagggactcatcacagctattgatcgctttgagcctaaaagg
agatttcggctctccacctatggtctattttggattagacatgccatcattcgttccttg
acaatctcaagctttctgcgtgtctcgtttggccttgaatcggttagagtagagatccaa
aaagctaaacttgaattgacatttgagcttcataggttaccgacagaagaagagataata
gaaagagttgggatctcccccgagagataccatgaagtaataagggcctcaaaatctgtt
ctgtcactccattcaaggcatgcaaccacacaagaagagtttattgatgggattacagat
gtcgatggtgttgatggtgttaatggtgataacaggaggcaacctgctattctcagactt
gctcttgatgatgtgcttgattccctaaagcccaaggagagcgtggtgattagacagaga
tatggccttgatggtaagggagatagaacactgggagaaattgctgggaacttaaatatt
tctagagaaatggtaaggaagcatgaagtcaaggctctcatgaagctcaagcatccagct
cgagtggattaccttcgaccctatgtagtataa
DBGET
integrated database retrieval system
