Quillaja saponaria (soapbark tree): O6P43_015757
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Entry
O6P43_015757 CDS
T09778
Name
(GenBank) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_015757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_015757
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_015757
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
O6P43_015757
Coactivators
SAGA/TFTC/STAGA complex
O6P43_015757
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
O6P43_015757
STAGA complex
O6P43_015757
TFTC complex
O6P43_015757
SAGA complex
O6P43_015757
SLIK complex
O6P43_015757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
LisH
PALB2_WD40
LisH_PAC1
Motif
Other DBs
NCBI-ProteinID:
KAJ7966258
UniProt:
A0AAD7LY57
LinkDB
All DBs
Position
6
Genome browser
AA seq
644 aa
AA seq
DB search
MDDDQILGFVTAYLKKKGFTQTEQAFQEELQHNKNSSSTTSIVEPDIAKQLMAFSELESG
PARYHDGYSRLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQDARNFFNTFRED
HEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQYLHKTQSTTIL
GVINEHINFLVSPGQPNSISDDPEAVTLTGSSQDAANKINHKEIHWGLLEDSIEERLEKA
GGLLSDSEKVEGEAKEGEVDEIKKRSGEGGKQGASSKKVKKDKAGSATGKTGRSEANVIS
MAPRVKPELPLPVIPTEVEQSILEDLRNRVQLSSIALPSVSFYTFINTHSSLNCSSISHD
GSLVAGGFSDSSLKVWDMAKLGQQPISSVLQGEIDVSHGEQFPGQSGGKRPYTLFQGHSG
PVHSATFSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSS
HDRTARIWSMDRIQPLRIMAGHLSDVDSGECVRIFIGHRSMILSLAMSPDGRFMASGDED
GTIMMWDLSSGRCVTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKLWDVTASTKAPRTE
ENRSGNSNRLRSLKTLTTKSTPVYSLQFSRRNLLFAAGALSKST
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgatcaaatactgggttttgtaactgcgtacctgaagaagaaaggttttacg
caaacagagcaggcttttcaagaagaactgcaacataacaagaacagttcctcaaccact
tcaatcgtcgaacccgacattgccaagcagctcatggccttctccgaattggagagtggt
ccagcaagataccatgatggatacagcagactaaggtcatggacttacagttccctagac
ttgtacaagcatgaattgcttcgtgtgctttatccagtatttatccattgtttcatggat
ctggtggctaaagggcatattcaagatgctaggaactttttcaataccttccgtgaagac
catgaaatgatgcacttacgagaccttcaaaagttggaaggagttctttctccttctcac
ctggaggagatggaatttgctcattcccttaggcagagcaaagtcaacataaagatatgt
cagtattcctatgagcttctgctgcagtatctgcacaagacgcagtccaccactatactt
ggggttatcaatgaacatattaacttcctagtttctcctggacagcctaactcaatttct
gatgatcctgaggctgttaccctcactggaagtagccaagatgcggcaaataagataaat
cataaagaaatacattggggattgcttgaagattctattgaagaacgcttggagaaggca
gggggtttgctttctgattctgaaaaggtagaaggagaagcaaaagagggagaggttgat
gagattaagaaaagatcaggggaaggaggaaaacaaggtgcttcaagcaagaaggtaaag
aaggacaaggctggaagtgcaacagggaaaactggtcgatctgaggcaaacgtcatatct
atggcaccacgagtcaaaccagagcttcctttgccagtaattccgactgaggtagaacag
tcaatcctggaggatttgagaaaccgtgtacagttgagtagcattgcactgccatccgtc
agcttttacacgtttatcaatacacatagcagtcttaactgttcatcaatatcccatgat
ggatctttggttgctggaggtttttcagactcatcactgaaggtttgggatatggcaaag
cttgggcaacaacctattagttctgttttgcagggagaaattgatgtgtcgcatggtgag
caatttccaggacaaagtggtgggaaaaggccgtatactttattccaaggtcattcgggg
ccagttcattcagccacttttagtcctcttggggatttcattctttcctcttcagcagac
tcaacaattagattatggagcactaaacttaatgccaatcttgtttgctacaagggtcat
aactaccctgtatgggatgttcagtttagccccgtagggcactattttgccagctcttca
catgacagaactgcaagaatttggtccatggatagaatacaacctttaagaataatggca
ggacacttgtcagatgttgatagtggggaatgtgtccggattttcattggtcacaggagt
atgattttgtctttggcaatgtctcctgatggtcgttttatggcatctggtgatgaagat
ggcacaattatgatgtgggacctctcaagtggccgctgtgttacacctttgattggtcac
acctcttgtgtctggacccttgctttcagttgtgaaggttctttacttgcatctggatct
gctgattgcactgtaaaattgtgggatgtaactgcgagtacaaaggcaccaaggactgaa
gaaaacagaagtgggaactctaacagactgagatccttgaaaactctaacaaccaagtct
actccagtttattctttgcagttttctcggaggaatcttctttttgcagctggggctctt
tcgaaaagtacctaa
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