KEGG   Quillaja saponaria (soapbark tree): O6P43_015765
Entry
O6P43_015765      CDS       T09778                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O6P43_015765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsa03021]
    O6P43_015765
Enzymes [BR:qsa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O6P43_015765
Transcription machinery [BR:qsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     O6P43_015765
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 zf-Sec23_Sec24
Other DBs
NCBI-ProteinID: KAJ7966268
UniProt: A0AAD7PSF4
LinkDB
Position
6
AA seq 1230 aa
MESPEAPSAMTGNSILINLKTLKSMGVSADAMGVSADVADVKDEIFTSKGGKYSNRVDMD
IDSTSIHELGQEFLKKFCKEASVSFFDEYGLISHQINSYNHFIKYGLQKTFDSFGELIVD
PGYDPSKKGEGGWRYVSLKFGKVTLEPPTFWGGEGNDKEYKMLPRHARLQRMTYSARMKV
NVHVQVYTQKLVRSDKSNTGEEQCIDRDIISDESRDIIIGRIPVMVKSDLCWMKGVEKDD
CDFDHGGYFLIKGTEKTFIAQEQIYLKKLWLFNNQGLTVAHKSHMKRNRLIIKLVGSPKV
DVIKVGALDKVLRVYFFSIEIPVWILFFALGVSSDREVIDLIDYSIDDSSILNILFASIR
DADEKCDGFRKGQEALSYVDKLIRSSRFPPVESTEECLRIYVFPSLGGLKHKARFLGYMV
KCLLLTHCGRRRCDDRDDFRNKRLDLAGELLERELRVHIAHARRRMTKAMQRDLYGDCVV
RPIEQYLDASILTNGLTRAFSTGAWSHPFKMVERISGVVATVGRTNPLQTMVDMRKTRQQ
VQYAGKVGGARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTNISEPVVPHLFDFG
MEELVDDTSTSLCGIDKVFLNGDWVGVCKDSLSFVAKLRNKRRGKELPHQVEIKRDEQQG
EVRIYSDAGRILRPLLVVDNLHKIKASKGGTKASKEKQYFFQSLLDLGVIELVGPEEEED
CCTAWAIQYLFAKEEGKPPVKYTHCELDMSFLLGLSCGIIPFANHNQARRVLFQAQKHSS
QAIGYHTTNPNLRVDTLSHQLHYPQKPLFCTMVSDCLGKPEYPLGYNGVLQKPEYFNGQN
AIVAVNVHLGYNQEDSLVMNLASMQRGMFRSEHIRSYKAEVDNKESLEKRRKLEDSTMYF
GKSKIDRGDSLDDDGFPFIGANLQSKDIIIGRCSDSGADHSIKLKHTERGYVQKVVLSSS
DDGKNFAVVSLKQVRSPTLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAF
PTRTTPGQLLEAALGKGIACGGSLRHATPFSTLSVDAITDQLHRVGFSRWGSERVYNGRT
GEMVDSLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVAERKRLGGVKFGEMERDC
LLAHGASANLHERLFALSDPSQMHICRKCKSVVNVIVRSISGGRKIRGPFCRGCESVEDI
VKISVPYGAKLLWQELLSMGISLKFETRLC
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggaatcgccggaagctccctcggcgatgacgggaaattctattttgatcaacctcaag
accctgaaatcaatgggtgtatcagcagatgcaatgggtgtatcagcagatgtagcagat
gtcaaggatgagattttcactagtaagggtggaaagtattcaaatagagttgatatggat
attgactcgactagcatacatgaacttggacaagagttcttgaaaaaattctgtaaggag
gcctcagtctcgttctttgatgagtatggtcttatcagtcaccagataaactcttacaat
cacttcattaagtatggtctacagaagacctttgattctttcggggagctgattgttgac
ccggggtatgatccatcaaagaagggggagggtgggtggcgatatgtttcactgaagttt
gggaaagtcacccttgaaccgccaacattctggggtggtgaaggaaatgacaaggagtac
aagatgcttcctaggcatgcccgactccagaggatgacatattcagcaagaatgaaagtg
aatgttcatgttcaggtttacactcaaaaactggttagaagtgataaatctaacactggg
gaagaacaatgcattgatagagatattatcagtgatgaaagcagagacatcatcataggg
agaatccctgtgatggtaaagtctgacctatgctggatgaaaggagttgaaaaagatgat
tgtgattttgatcatggaggctattttttgatcaagggcacggagaagacgtttattgcg
caggagcaaatatatttaaagaaactttggcttttcaataatcaaggtttgacagtagca
cacaagtctcatatgaagagaaataggttaattattaagctggtagggtctcccaaagtt
gacgtcatcaaagtaggagcgttagacaaggtccttagagtatatttcttctcaattgag
atccctgtatggattttgttttttgctcttggggtctcatcagatagagaagttatagat
ctgattgattacagtattgatgattcaagcattttgaacatactctttgcctcaattcgt
gatgctgatgaaaaatgcgatggatttcgtaaagggcaggaagcacttagttatgtagat
aaacttataagaagtagcagatttccacctgtcgaatctactgaagagtgccttagaata
tatgtttttcccagtcttggaggcctaaagcacaaagctcgctttcttggatatatggtg
aaatgtctcttactaacccattgtggtcgcagaagatgtgatgacagggatgactttaga
aacaaaaggctagacttggctggtgagctgcttgagagggagctgagagtgcatattgca
catgcacggagacgtatgacaaaggctatgcaaagagacctttatggagattgtgttgtg
cgtccaattgaacaataccttgatgcttccatactcactaatggtcttacacgagcattc
tctactggagcgtggtcacatcctttcaaaatggttgaaaggatttctggtgtagttgca
acggttgggagaacaaatccattgcagactatggttgacatgagaaaaacacgccagcag
gttcagtatgcagggaaagttgggggtgctagatacccgcatccttcgcactggggtaag
gtgtgctttctctctacccctgatggtgaaaattgtggacttgtaaaaaatttagctgtc
acggggcttgtaagtacaaacatatctgaacctgtagttcctcatttgtttgactttggg
atggaggagttggttgatgatacatctacctcactctgtggaatagacaaagttttcttg
aatggggattgggttggagtttgtaaagattccctttcatttgtggcaaaattaagaaat
aaacgacgcgggaaagagttgcctcatcaggtggaaatcaaaagagatgaacagcaaggt
gaagtacgtatatattctgatgctggaaggatattacgtcctcttttagttgttgataac
ctgcacaagattaaagcatctaaaggggggactaaagcatctaaagagaaacaatacttc
ttccagtctcttctggacttgggagtgattgagcttgttggacctgaagaagaagaagac
tgctgtactgcatgggctattcaatatttatttgcaaaagaagagggtaaacctcctgtc
aagtatacacactgtgaacttgatatgtctttcctattaggtctaagttgtgggattata
ccttttgcaaaccataaccaagcaaggagggtactttttcaggctcagaagcactcttcc
caggccattggttatcatacaacaaatccaaaccttagagtggatacactgtctcaccag
ttacattatccccagaagccacttttttgtacaatggtttctgattgtcttggaaaacct
gaatatccactaggttataatggagtactgcaaaagcctgaatacttcaatggccagaat
gccattgttgcagtcaatgttcacttagggtacaaccaagaggattccttggtaatgaac
ctggcttctatgcagcgtggtatgtttcgatctgagcacatcagaagttacaaggctgaa
gtcgataacaaagaatcattggagaagaggcggaaacttgaggactctactatgtatttt
ggaaaaagtaagattgatcgaggtgacagccttgacgatgatggttttccttttattggt
gcaaacctgcagagtaaggatattatcattgggagatgttcagattctggcgctgatcac
agtataaagctgaagcacactgaaaggggatatgttcagaaagttgtactgtcctcaagt
gacgatggaaagaattttgctgtggtttccttgaagcaggtccgcagtccaactcttggg
gacaagttttcaagcatgcacgggcagaaaggtgttttgggatttctggaatctcaagaa
aactttcctttcacaatccaagggatagttccagatattgtgattaatccacatgcattt
cctacacgaacaacccctggtcaactccttgaagctgcactaggaaagggaattgcttgt
ggtggttccttgagacatgccacccctttctccactctctctgttgatgccatcacagac
cagcttcatagagttggattttcaagatggggaagtgagagggtatacaatggtcgaact
ggtgagatggttgactcactcatatttatgggtcccacattctaccagcggctcactcac
atgtcagaagacaaagtaaagtttcgaaatactggtccagttcatccactcacccgacag
cctgtggcagaacggaagcgtcttgggggtgtcaagtttggtgaaatggagcgtgactgc
cttcttgcccatggtgcatcagccaacttgcatgaacgcctctttgccctcagtgatcct
tctcaaatgcacatttgtaggaaatgcaagagtgttgtgaatgtgattgtaagatcaata
tctggtgggcgtaaaataaggggtcccttctgccgtggctgtgaatctgttgaagacatt
gtgaaaatcagtgtaccttatggagcaaagttactgtggcaagagcttctgagcatgggt
atatctctcaagtttgaaacccggctttgctaa

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