KEGG   Quillaja saponaria (soapbark tree): O6P43_016055
Entry
O6P43_016055      CDS       T09778                                 
Name
(GenBank) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
qsa  Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:qsa03009]
    O6P43_016055
Ribosome biogenesis [BR:qsa03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    O6P43_016055
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_IP5PC_F WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_LRRK2 WDR54 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR75_2nd DUF7899 Beta-prop_BBS7 Ge1_WD40 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-ProteinID: KAJ7966607
UniProt: A0AAD7LYI8
LinkDB
Position
6:26586074..26590423
AA seq 449 aa
MEVVVASSSVDAGIGCWDLRTGAEQLRYKSCASPPHGLICIGERFLASTQLRESSASSGS
ILYWSWSKPQVDVKSFPAEPIKPIAANHQGTYIVGGGLSGNIYLWEVASGRLLKKWHAHY
RAVTCLVFSEDDSLVISGSDDGSVRVWSLFMIFDGFQRQEANHLYVHSFSEHTLRVTDVA
IGYGGWNAIIVSASEDRTCKVWSLSRGTLLRNIVFPSVIDAIALDAAEHVFYAGSRDGKI
FIAALNAESTSSKSYGLHIISSLSNHSKAVTCLTYGTSGNLLLSGSEDGMVRVWDTKTHN
IIRVLRHSKGPVNNILVVRQQLKFNYGMSPNLQTSSRRQGSLLPPPLEKYANSTDEDSNI
VSVIGNPDGNIPRNASYITTHVMTDQVRQLQHQGSAAASEMEVERLKLECKRSIEMFNKW
KKMYENLHHFCVNELLDGDREGVFNGNCS
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaggtagtggtggcatcttcttctgtcgatgccggaatcggctgctgggacctgcga
acaggggctgagcagctccgttacaaatcttgcgcttctccgccgcatggcctcatctgc
attggtgagcggtttcttgcttccactcagcttcgagaatcatctgcctcctccggctcc
attctctattggtcctggtcgaagcctcaagtagatgttaagagctttcctgctgaacca
attaagccgattgctgctaatcaccaaggcacttacattgttggtggaggtttatctggg
aatatttacttgtgggaggttgcaagtggcagattgcttaagaagtggcacgctcattat
agggctgttacttgcttggtattttctgaggatgactcgttggtgatatccggttcagat
gatggatctgttagagtttggtcccttttcatgatatttgatggtttccagaggcaggaa
gcaaatcatctatacgtgcatagcttttcagagcatactctgcgagtgactgatgttgct
attggttatggaggttggaatgcaattatagtgtcagcttctgaggacaggacgtgtaag
gtatggagcttgtcaaggggaacactactgagaaatatagtattcccttcagttattgat
gcaattgcactagacgctgctgaacatgtcttttatgctggcagtagagatggaaaaata
ttcattgctgcacttaatgctgaaagcacctctagtaaaagttatgggttgcacatcata
agctcattatcaaaccacagcaaggcagttacttgcctaacatatggtacaagtggaaat
ctattattatctgggtcagaggacggaatggttcgagtatgggacaccaaaactcataac
attattcgtgtgctaaggcattcaaaaggtccagtgaataatattcttgttgttagacaa
caacttaaatttaattatgggatgtctccaaatcttcaaacttcctcaagaaggcagggg
tctttattaccccctccattggaaaaatatgcaaattcaactgatgaagactcaaatatt
gtatctgttattggcaatccagatggcaatatacctagaaatgcttcatacatcaccact
catgtgatgactgatcaagttagacaacttcagcatcagggttctgctgctgcatctgaa
atggaggtggagagactaaagcttgaatgcaaaaggtcaattgaaatgtttaacaagtgg
aagaaaatgtatgaaaatttgcatcacttctgtgtaaatgagcttttggatggtgaccga
gagggagtctttaatggaaattgcagctaa

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