Quillaja saponaria (soapbark tree): O6P43_016366
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Entry
O6P43_016366 CDS
T09778
Name
(GenBank) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
O6P43_016366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qsa02000
]
O6P43_016366
Transporters [BR:
qsa02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
O6P43_016366
BRITE hierarchy
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
KAJ7966974
LinkDB
All DBs
Position
6
Genome browser
AA seq
1294 aa
AA seq
DB search
MGIRLRFLVSVRLFLAILVVSLVHAGSLDTRLLLTSGGMTPGERHSEEYCAMYDICGKRS
DGKVLNCPFGSPSVKPDDLLSSKIQSLCPTIVGNVCCTEAQFDTLRTQVQQAIPFLVGCP
ACLRNFLNLFCELTCSPNQSLFINVTSIGKVGSNSTVDGIDFYVTDAFGEGLYDSCKDVK
FGTMNSRAIEFIGAGAQNFKEWFAFVGRKTGLKVPGSPYTITFRSNTTESSGMKPMNVSS
YSCGDTSLGCSCGDCPSSSVCSNTVPPASHKRDSCSMRIGSLKVKCIDLILTILYIILFS
VCLGWGIYRRRRERNPASRTKPLSNLMDAGAPHSLDRKKDENLPMQMLEDDPQIRNRVQL
SVVQGYMSNFYRIYGTFVARNPTLVLSSSVAVALLLCLGLIHFKVETRPEKLWVGPGSKA
AQEKQFFDSHLAPFYRIEQLILATIPDYEHSKSQSIVSENNIKFLFDIQKKVDGIRANYS
GSVISLDDICLKPLDQDCATQSILQYFKMDPENFDNYGGVEHLHYCFQHYSSADTCLSAF
KAPLDPSTALGGFSGNNYSEASAFLITYPVNNAVDKEGNETAKAVAWEKAFIQLVKDELL
QMVQAKNLTLSFSSESSIEEELKRESTADAITILISYLVMFAYISLTLGDTPHLSSFYIS
SKVLLGLSGVMLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVQAVKR
QPLELPLEGRVSNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFL
LQVTAFVALIVFDFLRAEDKRVDCFPCIKIPSPHADTDKRIGQRKPGLLARYMKEVHAPI
LSIWAVKIFVIAIFVALALASIALCTRIEPGLEQKIVLPKDSYLQGYFNNVSEYLRIGPP
VYFVVKNYNYSSESSHTDQLCSISQCNSDSLLNEIARASLVPESSYIAKPAASWLDDFLI
WLSPEAFGCCRKFINGSYCPPDDQPPCCAPDEGTCRTVGICKDCTTCFRHSDLHNDRPST
TQFREKLPWFLNSLPSADCAKGGHGAYTSSVELRGYENGIIQASSFRTYHTPLNKQVDYV
NSMRAAREFSSRISDSLKIEIFPYSVFYMFFEQYLDIWKTALINLAIAIGAVFIVCLVIT
CSLWSSAIILLVLAMIVVDLMGVMAILDIQLNAVSVVNLVMSVGIAVEFCVHMTHAFAVS
SGDKDQRAKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVIYYFQMYLALVLLGFLH
GLVFLPVVLSIFGPPSRCVLVEQREDQSSASSQL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgggcattcgtctacgatttcttgtttctgtacgtctcttcctggctattttagttgta
tctctggtacatgcggggagtttggatacacggcttcttttgacatcgggtggcatgaca
ccaggggaaaggcattctgaagaatattgtgcaatgtatgatatctgtgggaaacgtagt
gatggaaaagtattgaattgtccttttggttccccatctgtgaagccagatgatttgctt
tcatcgaagatccaaagtttatgtccaacaattgttgggaatgtttgttgtacagaagct
caatttgatacattacggactcaagtccaacaggcaattccttttcttgtaggatgtccg
gcatgcttgagaaactttttgaatttgttttgtgagcttacttgctctccgaatcagagt
ttattcattaacgtgacttcaattggcaaggttggtagcaattcgacagttgatggaatt
gatttttatgtaactgatgcttttggtgaagggttatatgactcctgcaaggatgtgaag
tttggtaccatgaattctcgagcaatagaatttattggtgctggtgctcaaaactttaaa
gagtggtttgcttttgttggtagaaagacaggccttaaggtgcctggttccccatacacc
attaccttccggtcaaatactactgagtcatctggaatgaaacctatgaatgtttcaagt
tattcatgtggtgatacttctcttggatgttcttgtggtgattgcccttcatcttcagta
tgttctaatactgttcctccagcttcccataaaagggattcctgctccatgagaatcggg
tctcttaaggtgaaatgtattgacttgattttaactatcctatacatcatactgttttct
gtgtgtttgggatggggaatatatcgtcggagaagagaaaggaacccagcttcaagaacg
aaaccactgtctaatctcatggatgcgggtgcaccacattctcttgataggaaaaaggat
gagaacctccccatgcagatgctggaagatgatcctcaaattagaaatcgagtccagctt
tctgttgtgcaaggatacatgtccaatttttacaggatatatggaacatttgtagctaga
aatccaactctggtgttgtcttcatcagtggctgtagctcttctactttgtttagggcta
atccatttcaaggttgagacacgacctgaaaagctttgggtaggacctgggagtaaagct
gcgcaagagaaacagttttttgacagccaccttgcccctttttacagaattgaacagctc
atccttgcaacaatcccagactatgagcacagcaaatcacaaagtattgtgtcagagaac
aacattaagtttctttttgatatacaaaagaaggttgatggaattcgtgctaattattct
ggctcagtgatatcacttgatgacatctgtttgaagccacttgatcaggattgtgctact
caaagcatcctgcagtatttcaaaatggatcctgaaaactttgataattatgggggagtt
gaacatcttcactactgcttccagcattattcctctgcagacacatgtttgagtgcattt
aaagctcctcttgacccgagtactgcattaggaggtttctctggaaacaattattctgag
gcatctgcatttttaataacttatccagtaaataatgctgttgataaagaggggaatgaa
actgcaaaggcagtggcttgggagaaggcctttattcagttggtgaaggatgagctgctg
caaatggtgcaagctaaaaatttgacactttctttttcatcggagagctccattgaggaa
gaattaaaaagagaaagtactgcagatgccattaccatattgataagctatcttgtgatg
tttgcttatatatcacttactttaggggatacaccgcacctatcttctttctacatttca
tcaaaggtattgcttggtctttctggagtgatgcttgtgatgctgtctgtccttggatca
gttggctttttcagtgcaattggagtaaaatccacactaatcattatggaagttattcca
tttcttgttctagctgttggggtggataatatgtgtatactagttcaagctgtcaagcgg
caaccattggagttgcctttagaaggacgagtaagcaatgcacttgtggaagttggacca
tccataacgttagctagtctgtcggaggttttagcatttgcagttggaagttttattccc
atgcctgcatgccgtgtgttctcaatgtttgcagcattagccgttcttttggacttcctc
ctgcaagttactgcatttgttgctttgatagtttttgacttcttgcgagctgaggataag
agagttgattgtttcccatgcataaaaattccttcaccacatgctgacactgataaacgc
attggtcagaggaaaccgggtctgttggctcgatatatgaaggaggttcatgcgcccatt
ctgagtatttgggcagtcaaaatttttgtcatagctatttttgtggcattagcgttggct
agcatagcattgtgcacccgaattgaacctggtttagaacaaaagattgttcttccgaaa
gactcgtaccttcaggggtatttcaataatgtttctgagtatctcagaattggaccacct
gtatattttgttgtcaagaactataactacagctcggaatcaagtcatacggatcagtta
tgctccattagccaatgcaattcagactctcttttaaatgagattgctagagcatcttta
gtaccagaatcaagttacattgctaagccagctgcttcatggcttgatgattttctcatt
tggttatctccagaagcatttggatgctgcaggaagttcataaatgggagttactgtcca
cctgatgatcagcctccttgctgtgctcctgatgaaggtacttgccgcacggttggaata
tgtaaagattgcacaacgtgcttccgccactcagatctccataatgaccgtccatctaca
acacaatttagggagaaacttccttggtttcttaattctctaccatctgctgactgtgcc
aaaggtggtcatggggcgtacaccagcagtgtggaactgagaggctatgagaatggtatc
atccaagcatcatcattccgtacatatcatactccactgaacaagcaggttgattatgtc
aactccatgagggctgctagagagttcagttcccgaatttcggattctttgaagattgag
atcttcccatactcagtgttttatatgttttttgagcaataccttgatatatggaagacc
gcactgatcaatcttgctatagctattggtgcagtatttattgtttgtttggtcatcaca
tgcagtttatggagttcagcaatcattttgttggtgttggcaatgattgttgttgatctc
atgggtgtgatggcaattctggatatccagttgaatgcagtatctgttgttaaccttgtt
atgtcagtaggtattgctgttgagttctgtgtgcatatgactcatgcttttgcagtaagc
agtggagataaagaccaacgtgctaaggaggctctggggacaatgggggcatcagtcttc
agtggcatcacgctaacgaagctggttggtgttattgtactttgcttctcaaggacagaa
gtttttgtgatttattacttccaaatgtacttggcgttggtacttcttggtttcttgcat
ggacttgtattcttgccggtagtattaagcatctttggtccaccctcaagatgcgtgctt
gtagagcagagagaagatcagtcatcggcttcatcacagctataa
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