Quillaja saponaria (soapbark tree): O6P43_016620
Help
Entry
O6P43_016620 CDS
T09778
Name
(GenBank) RNA polymerase II C-terminal domain phosphatase-like
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsa01009
]
O6P43_016620
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_016620
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
O6P43_016620
Protein phosphatases and associated proteins [BR:
qsa01009
]
HAD phosphatases
Fcp/Scp phosphatases
O6P43_016620
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
O6P43_016620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7961255
UniProt:
A0AAD7LQQ5
LinkDB
All DBs
Position
7
Genome browser
AA seq
802 aa
AA seq
DB search
MSRLGFKSVVYHGDVLLGELDVIPVTDHNFQFPNSEIRVHHLSPHSERCPPITILQTISS
FSVRCKLESSAPVAQTHLINLHACCFFESKTAVVLVGGEEIHLVAMPSKQKKFPCFWCYS
NPVGQYDSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRGWLARETDPLRVSGM
SAELKRYTDDRSLLKQYAESDSVVDNGNTFKVQLEEVPPLSDSHEKEKVFRPIIRLPEKN
IVLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP
EAHLIASKQLLDRVVCVKSGSRKSLLNVFQNRICHPKMALVIDDRSKVWDDKDQPRVHVV
PAFTPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENLFKRISEVSYEDEVANLPH
PPDVSNYLMSEDAGFVPNGNPNAPISEGINGIEVEQRLNQSEEKSTVDLATITSSDELRS
GNFEPPVAIISPGSSTTVLPSQKPGLLGAPVRCDGSLGDRDYDMKRRLLPMRHGLNIKNQ
TSGEPPLLRLPIKASPSLMQQQGGWLVQDDKNRGQPNNQPSGFVQVSDAVKPDMQWTQPK
PFSYTASVLSSHGVLPHAFQAKSEEESAVRDSQGQSLPPPSQFSEVGVPQKQVSSNSRDI
QTEAGKLNLLPSPLSIGVLQEIGRRCSSKIEFRSIVSTSRDLQFSVEVLFTGEKIGVGMG
RTRKDAQQQAAENALRSLAEKYVAYMEPRSEAVDRDIDKLSLGNENGFLLDVVNPGLDEL
QREDGFPNESTSEVGIPDDFLL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttagggtttaaatcggtggtctatcatggcgatgtactgttgggagagctg
gatgttattccagtcacggaccataatttccagtttcctaacagcgagattcgagtccac
catttatctccacacagtgaaagatgtcctcctattacaattcttcaaacaatttcttca
ttttcagttcgatgcaagctcgaatcttcagcacctgttgcacaaacccatttgatcaat
cttcacgcctgttgcttttttgaatccaagaccgcagttgtgctagttggaggtgaagaa
attcacttggtggcaatgccgagtaagcagaagaagtttccttgcttttggtgttactct
aatcctgtgggtcaatacgattcatgtctggggatgttgaatctaaggtgtctttcaatt
gtatttgatcttgatgagaccctcattgtcgccaacaccatgaagtcatttgaagataga
atcgaggctcttcgaggttggcttgcgcgtgagactgatccacttcgggtgtctggaatg
tctgctgaactgaagcgttacacggatgatagatcactgttgaagcagtatgcggaaagt
gactctgttgtagataacgggaatacatttaaggttcaactggaggaggtccctccattg
tctgattcccacgagaaagagaaagttttccgtcctataattagattaccagaaaagaac
atagtccttactcgcataaatcctgaggttcgtgataccagtgttcttgtgaggttgcgc
cctgcttgggaggatttgagaagttatttaactgcaaaaggacgcaagcggtttgaagtt
tatgtctgtactatggctgaaagggattatgccttggaaatgtggaggctcctggaccct
gaggcacatcttatagcttcaaagcaactccttgatcgggtagtttgcgtcaaatcaggc
tccagaaaatctttgctaaatgtattccagaatcggatatgccacccgaagatggctttg
gtaattgatgaccggtcaaaggtttgggatgacaaggatcaaccccgggttcatgtagtt
cctgcatttactccttactatgctcctcaggcagagacagcaaatgctgttccagtcctt
tgtgtagcaagaaatgttgcatgcaatgtcagaggtttatttttcaaagagtttgatgag
aatttgtttaaaagaatatctgaagtctcttatgaagatgaggtggcaaacttaccccac
cctccagatgtgagcaactacttgatgtcagaggatgctggttttgtaccaaatggtaat
cctaatgctcccattagtgaaggaataaatggtattgaagtcgaacagagattaaaccaa
tcagaggagaagtctactgttgacttagccactatcacaagcagtgatgagttgagatct
ggaaactttgagccacctgttgctattatttcacctggatcttcaacaacagtgttgcct
tctcagaaacctggtttgcttggagctcctgttagatgtgatggtagcttgggtgatcgt
gattatgacatgaagagaagacttcttcccatgaggcatggtctaaatataaagaatcaa
acttcaggtgaacctcctcttctaaggttacccataaaagcatcaccatccttgatgcag
cagcagggaggctggttggtacaagatgataaaaatagagggcaaccaaataatcaacct
tctggatttgttcaagtatctgatgctgtaaaacctgatatgcaatggactcaaccgaaa
ccattttcttatactgcgtcagttttatcttcccatggcgtactcccacatgcattccaa
gcgaagagtgaagaggaaagtgctgtacgtgattctcaaggacaaagtcttccacctcct
agtcagttctcagaggttggtgtacctcagaaacaagtttcttctaatagcagagatatt
caaactgaagctggaaagttaaacttgctcccttcgcctttatctatcggtgtactgcaa
gaaattggaaggagatgtagttcaaagattgaattcaggtccattgtaagcactagcagg
gatttgcaattttctgtagaggtactatttactggtgagaagataggtgttggaatgggt
cggacaaggaaggatgctcaacaacaagctgccgagaatgcccttcgtagcttggcagaa
aagtatgtagcgtacatggaacctcgttctgaagctgtggacagagatattgataagctt
tctcttggaaatgagaatggtttcttattggatgttgtcaaccctggattggatgagttg
caaagagaagatggttttcccaatgaaagcacttcagaggtggggattcctgatgatttt
ttattgtag
DBGET
integrated database retrieval system
