Quillaja saponaria (soapbark tree): O6P43_017998
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Entry
O6P43_017998 CDS
T09778
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O6P43_017998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_017998
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
O6P43_017998
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
O6P43_017998
DNA repair and recombination proteins [BR:
qsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O6P43_017998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fpg-like_C
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
KAJ7962825
UniProt:
A0AAD7LR47
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All DBs
Position
7
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AA seq
403 aa
AA seq
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MPELPEVEAARRAIAENCLGKKIKRSVIADDSKVIDGISRSDFEASITGKTIISAHRKGK
NLWLELDSPPFPSFQFGMTGAIYIKGVAVTKYKRSAVNDADEWPSKYSKFFIEMTAWSCH
SLTKGGLLKYACSKIQHWCPQYLNSGPDALLEPMTVDEFTESLSKRKIAVKALLLDQSFI
AGIGNWIADEVLYQARIHPLQIAASLSKESCLTLHQCIKEVIEKAVEVGADSSQFPTNWI
FHSRENKPGRAFVDGKKIDFITAGGRTSAYVPELQKLSGSQGAKEAGKRRRQTSKRKSSK
NDDDSEEPTNEEEENLGSAKLNKGPAPRDRGKKRSTKRKSTESEDEDAAADDGNDNGNND
DTDQVLKRTGKMTINNKHAKEEKTSMKKVQTTQNNRNKKKKAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcttccggaggtagaggccgcaaggagagctatagcggagaactgtctgggc
aagaagataaagaggtccgttatagccgatgattccaaggtcatcgatggcatctcgcgc
tcggattttgaggcttccatcactggaaagaccatcatttccgctcatcgtaagggaaag
aatctctggctagagttggactcccctccttttccctccttccaattcggcatgactggt
gctatatacataaagggggtcgcagtcacgaaatataagaggtctgctgtaaatgatgct
gatgaatggccatccaaatattccaagttttttatcgaaatgacggcttggagttgtcat
tcactgacaaaaggcggtttgctaaagtacgcttgctcaaagatccaacattggtgcccc
caatatctgaactctggtcctgatgcattgttagagcctatgacagttgatgaattcact
gaatccttgagcaagaggaaaattgcagtcaaagctttattacttgatcagagtttcatt
gcaggtattggaaattggattgctgatgaagtgctataccaagctagaattcatccactg
caaattgctgccagcctgtccaaagaaagctgcttaactttgcatcagtgcattaaagag
gtcattgaaaaagcagttgaggttggggcagatagtagtcagtttcctactaattggata
tttcattcacgcgaaaataagcctggcagggcttttgttgatgggaagaaaattgatttt
atcacagctggcggcaggacatcagcgtatgtgccggagttacaaaagctgagtggatca
caaggtgcgaaagaagctggtaagcgaagaaggcaaacttctaagagaaaaagtagcaaa
aatgatgacgactcagaggaaccgacaaatgaggaagaggagaatttaggaagtgccaaa
ttgaacaagggcccagcgcctagagatcgtggtaagaaacgttccacaaagaggaaatcc
acagaaagtgaggacgaggatgctgctgctgatgatggtaatgataatggcaacaatgat
gatacagatcaagttctgaagagaactgggaagatgactatcaataataaacatgctaag
gaagagaagacatccatgaaaaaagttcaaaccactcaaaacaatagaaacaagaaaaag
aaagccaagtag
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