Quillaja saponaria (soapbark tree): O6P43_018036
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Entry
O6P43_018036 CDS
T09778
Name
(GenBank) Pectin lyase-like superfamily protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa00040
Pentose and glucuronate interconversions
qsa01100
Metabolic pathways
Module
qsa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O6P43_018036
Enzymes [BR:
qsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
O6P43_018036
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-ProteinID:
KAJ7962869
UniProt:
A0AAD7LR96
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Position
7:22935327..22941366
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AA seq
722 aa
AA seq
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MGAFLSIYTLSLFLVMMLICINGESTNQKTFNVLRYGAVGDGRRDDSEAFSNVWRDSCNA
VTDKATIIIPGGKTFLVQPIVFTGPCKPKQINILLSGVIVAPLGPSSWKGKDVEKWIVFK
KVSGLNLDGSGSFDGRGKSWWDHKCRYHPGKGCIVVAPTVLYIESCNDVKVSRISIKDSP
QGQIAVLGGVNFDFGFLKIHTPGYTLNTDGIHLQSCSYVNIHNTDISSGDDCISIGDYTS
FINVTNVNCGPGHGVSIGSLGLGGGKANVHNITVQHVNFFGTTNGVRIKTYKVGRGEVKN
VVFSNLNFTNVENPIIIDQYYGLKPNRFPRMELLIMFMLLSMAFSGLSTETINSVSVMEY
GAVGDGNTDDSPAFLKAWEEVCKSESTNSSLTIPGKNFLLKPVTFNGPCKSSYINVQLSG
NLVAPKSKSDYKGYHLDTWLSFSNINGLVITGDGTIDGQGSVWWPNPCFGAAPKAMKFNR
CYGLVLSGLRHVNSARNHITITKCDNATISKLHITAPGTSPNTDGIDIASSTGVQVHDSV
IGTGDDCIAISGGSSMINITGVFCGPGHGISIGALGVHGESDIVEEVHVRNCTFEGTLTG
VRIKTWQGGSGYARKIYFEEIQLNAANSPIIIDQFYCPGGGGCQNKASAVKVSDVSYKEI
KGTSMTDKAINLSCDDNVSCTNIVLDHVHITAADPKKKVSSSCNNAHGRSSNTIPVVDCL
LQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcattcttgagcatatacactttgagcttgtttttggtgatgatgttaatttgc
atcaatggtgaatctacgaatcagaaaacgtttaacgttctaagatatggagcagttggt
gatggaagaagagacgattctgaggccttttcaaatgtatggagagactcatgtaatgca
gtcacagacaaggctacaatcatcattccaggaggaaagacttttttggtgcaacccata
gtcttcacaggcccttgcaaacctaagcagatcaacatcttgttatctggagtgatagta
gcaccacttggtcctagttcatggaaaggaaaagatgtggaaaaatggatagtctttaag
aaagtttcagggctaaatctagacggctctggttccttcgatggccgtggaaagagctgg
tgggatcacaaatgcagataccatcctggaaagggttgtattgtcgttgctcctacggtg
ctttatattgaaagttgtaatgatgtcaaggtcagcagaatctctatcaaagatagcccc
caaggtcaaatagctgtgctgggaggtgttaattttgatttcggatttttaaaaatacat
accccaggatatacccttaacactgatggaattcaccttcaaagctgcagctatgttaac
atccataacacagatattagttctggggatgattgtatctcaattggagattatacttca
ttcatcaatgtcactaatgttaattgcggtcctggtcacggagtaagtatcggcagcctc
ggtttgggtggagggaaggcaaatgtacataacatcaccgtgcagcatgttaacttcttt
ggcacaaccaatggtgtcaggattaagacctataaggtgggtcggggggaagttaaaaat
gttgtcttctcaaatctgaacttcacaaatgtggaaaatccaattattattgaccagtat
tatggtcttaagcccaaccgtttcccaagaatggagcttctcatcatgttcatgctttta
agcatggctttttctggattgagcactgaaacaataaattctgtcagtgtgatggaatat
ggagctgttggagatggaaacacagatgattccccagcttttctgaaggcttgggaagag
gtctgtaaaagtgagtcaacaaattctagcctcactataccagggaagaacttcttactg
aagcccgtgacattcaatggtccatgcaaatcctcttatatcaatgtccagttgtcagga
aacttagttgcacctaaatcaaagtcagattataagggctatcacttggatacatggctt
tccttctcaaacataaatggcttagttattactggagatgggacaatcgatggtcaagga
tctgtttggtggccaaacccttgttttggggctgcaccaaaagcaatgaaatttaacaga
tgttatggccttgtactcagtggactgagacatgttaatagtgcaaggaatcatattact
attacaaaatgcgacaatgcaaccatttctaaactacatataactgctcctggaacaagt
cctaacactgatggtatcgacattgcaagctcaaccggagttcaagttcatgattctgtc
attggaacaggtgatgattgcattgcaatcagtggaggatcctccatgatcaatataact
ggtgttttttgtggtccaggccatggtatcagcatcggtgccttaggagtacatggagag
agcgacattgtggaggaagtacatgttcgaaattgtacttttgaaggaacattaacagga
gtaaggatcaagacatggcagggtggaagtggatatgctaggaaaatttattttgaggaa
attcagttgaatgcagcaaatagccccattatcattgatcaattctactgtcctggtgga
gggggttgccaaaacaaggcatctgcggttaaggtgagtgacgtatcctacaaggagatc
aaaggaacatcaatgaccgacaaagccataaatttgagttgtgatgacaatgtgagttgt
accaacattgtgcttgatcatgttcacataacagctgcagatccaaagaagaaagtttct
tcaagctgcaataatgcccatggaagatcctccaataccatccctgttgtagattgctta
ttgcaatag
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