Quillaja saponaria (soapbark tree): O6P43_018052
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Entry
O6P43_018052 CDS
T09778
Name
(GenBank) Lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P43_018052
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qsa01002
]
O6P43_018052
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsa04121
]
O6P43_018052
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_018052
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_018052
Peptidases and inhibitors [BR:
qsa01002
]
Metallo peptidases
Family M67
O6P43_018052
Ubiquitin system [BR:
qsa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
O6P43_018052
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
O6P43_018052
BRISC complex
O6P43_018052
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
O6P43_018052
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
O6P43_018052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
KAJ7962890
UniProt:
A0AAD7LTP1
LinkDB
All DBs
Position
7:complement(23015003..23020630)
Genome browser
AA seq
436 aa
AA seq
DB search
MSLTGVKMSEEVWLTCITHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASALAERMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCYSEDINKVGRIQVIAFQSSDGKQNQMSRPISLSPVNRSAIIDLESSLSSS
DNASIRSGSLRIDSPEQDTGDSRTGANKGGGRSSELGVFFANADANHQGREKSGGNYYTN
NSDAPIIDVDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPALSLINLESPLMSLT
DLQHVLYEEERTAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQD
RLRENEIRLALLTDEAKTLETVAFRGGESHLGSPRQAPSHGLRGSPSFGHRDLHPSSESP
SSRNLGSPGSRSRKGY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaccggcgtgaaaatgtccgaagaggtgtggttgacatgtatcactcatgca
ttgtcaacggagaccgaagagatcatgggccttcttctcggtgatatcgagcattcaaag
aatgggagtgtgacggcattaatatggggagcatctccacagactaggtccgatcgtcgg
aaggacagagtagagactaatcctgaacagttggctgcagcatcagctctggctgaaaga
atgactatatcgactggaagaaccacaagggttattgggtggtatcattcgcatccgcat
atcacagttcttccttctcatgttgatgtgcggactcaagcaatgtatcaacttctggac
tctgggtttattgggctgatattttcctgttatagtgaagatataaacaaggttggaaga
attcaagtcattgctttccagtcctccgatggaaagcagaaccaaatgtcaagacctata
tctctctctcctgtaaatagaagtgcaattatagatcttgaatcatctttaagttcctct
gataatgcatctataagatctggttccctaaggatagatagcccagagcaagatacgggt
gattcaagaactggagctaataagggtggaggaagatcttcagaattgggggttttcttt
gctaatgctgatgccaaccatcaagggagagagaaaagtggcggaaattactataccaac
aactcagatgcccccatcattgatgtagatcccatggatatgtcagaaagtatgcaggaa
gctatgcaccgttcgaatttggacatgagtggtgcagagtatgtacgaaaagaaatccct
ctgcatgttttgccagccttgtctcttatcaaccttgaatcaccattgatgtcacttacg
gatctgcaacatgtactatatgaagaggagaggacagcatataaccaagccattttgcaa
aatatgagggatgggaaagtgcatccgctaactttcatacatcacacatcaacatatcag
gcctccttgtgcaaattgatagaatattgtttgagtcctgcaataaatgcacttcaggat
cgcttgagagagaatgaaatccggttagccctacttaccgatgaagcaaaaactttggag
accgtggctttcagagggggtgaatctcatttgggatctccccgtcaagctccgtctcat
ggactccgaggaagtccttcatttggtcacagggatttgcatccttcatccgaatccccc
agttctaggaatcttggaagtcctggcagtcgtagcagaaaaggatattaa
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