Quillaja saponaria (soapbark tree): O6P43_018210
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Entry
O6P43_018210 CDS
T09778
Name
(GenBank) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_018210
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O6P43_018210
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
90S particles
Helicases
O6P43_018210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
ATPase
AAA_19
TsaE
PhoH
Motif
Other DBs
NCBI-ProteinID:
KAJ7963069
UniProt:
A0AAD7LRM2
LinkDB
All DBs
Position
7
Genome browser
AA seq
1324 aa
AA seq
DB search
MATPQLQLLDSGNHIASLEDGDSNAIMLPGKKNKKRKGLNQKHGEVKSNKKQKLSKSQKR
KIKKLEEEKEKELLLSNSIETLNKYKIPEYAYPLLQSSRNINQAESMLEKRRRAAHLLKE
GLELPHGYEPFSKSDELCGVEPESEVIHSGLEIRGNRILPLTITQTEVSIVTSVSLDYSQ
RSVLSNGVETDSGSLAASQAEVSTEKMTSMANDETENTNLVDKAEESLKANLSQISKPQD
ASVERILTTPTVVHVFRPAEVEEKRKDLPIVMMEQEIMEAINEHSIVILCGETGCGKTTQ
VPQFLYEAGFGSSKSRVHSGIIGVTQPRRVAVLATAKRVAYELGLHLGKEVGFQVRYDKR
IGDNCSIKFMTDGILLKEVQNDILLSRYSVIILDEAHERSLNTDILIGMLSRVIKLRQVH
YDQQQQKLQSGESISPECMIFPLKLVLMSATLRVEDFISQRLFFTQPPVIEVPTRQFPVT
VHFSKKTEIVDYVGQAYKKVLAIHKRLPHGGILVFVTGQREVEYLCKKLRRASRDLILKN
SKRTIENDGTMISEAKTIEGINMTEINEAFEVHGNSAHQQTDRFSSYDEGYSDEHEDKSD
VSYDSETESELEVSGDDLELFHHEHQEKNDNLVLGEDGTLASLKASFEALSGKTELNSNI
DEKQTPPPSTEECLEQSKTCTEKSIRGDSGSCPGGLYVLPLYAMLPAAAQLRVFEEVKEG
ERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYNSSNGMETYEVQWISKASAAQRAGRA
GRTGPGHCYRLYSSAVFTNVLPGFSLAEISKVPVEGVVLLLKSMRIKKVVNFPFPTPPKD
AALVEAENCLKALEALDSHGELTLVGKAMAQYPLSPRHSRMLLTVIKTIRHELNCSRASL
ILAYTVAAAAALSLSNPFLMEFEGSNTNSNESRVHEESSVRDNEKVRDKQEKIRKKKLKE
TAKVARKKFRNLTSDALTVAYALQCFECSQSPVEFCNSYALHLKTMEEMSKLKQQLLKLV
FYHSVGGVEQYSWHHGNLEDVEHAWRASSEKYPLSLDEEVLIRQAICAGWADRIAKRITV
TSRSSDGDIKARAVRYQSCMVEEIVFLHRWSSVSIAAPEFLVYNELLQTKRPYMHGVTSV
EASWLVDYARSSCTFSAPLTDPKPFYDAQTDQVKCWVVPTFGRFSWELPKHALPIIDVEH
RAQVFAYAFLEGQVCPCLKSAREFMAAPPESILKREALGQKRVGNLLSKLKVESIDSRAK
LTMAWKKNPWVLYSEVLDWFQKSFQKHFRERFWLPMHGEVFIEPQQTFSPKVKRQLKGKA
KLPR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccccaactgcaactcttggattccgggaatcacatagcaagtttggaagat
ggtgatagcaatgcaattatgttaccgggtaagaaaaataagaagaggaaaggcctgaat
cagaaacatggagaggtgaaatcaaacaagaaacaaaagttgagcaaatctcagaaaaga
aagataaagaaattggaggaggaaaaggagaaagaattgttgctgtccaacagtatcgag
actttgaacaagtacaagattccagagtatgcatatcctcttttgcagtcttcaaggaat
atcaatcaggctgaatctatgttggaaaaacgtaggagggctgcacatttattgaaagaa
ggcttggagcttccacatggttatgagcctttcagtaaatcagatgaattgtgcggagta
gaacctgagagtgaagtaattcattcagggctggagattagaggaaatcgaattttgcca
ttaacgataacacaaacagaagtctcaattgtgacatctgtttctttggactactctcaa
agatcggttttaagcaatggagttgagacagatagtggatcccttgctgcctctcaagct
gaagtttccactgagaaaatgacatctatggctaatgatgagacagaaaacaccaattta
gtggataaggcagaagagagccttaaagccaatctcagccaaataagcaaaccccaagat
gcttctgtggagagaattttaactactcctacagtagtacatgtattcagaccagctgaa
gttgaggaaaaaaggaaggatcttcctatagttatgatggagcaagagataatggaagct
ataaatgagcattctattgttattttatgtggagaaactggatgtggcaaaaccactcaa
gttcctcagtttctttatgaagctggctttggttcaagtaaatccagagttcacagtggt
attattggtgttactcaaccacgccgggttgctgtccttgccactgcgaagcgagtagca
tatgagcttggtcttcatctagggaaagaggttgggtttcaagttagatatgacaagagg
attggagataattgctctatcaagttcatgactgacgggattttactaaaagaagttcag
aatgacattctactgagtcgctactctgtcatcattctagatgaagctcatgagaggagc
ttgaatacagacattcttattggaatgctttctcgtgtaattaaacttcgccaggttcat
tatgaccagcagcagcagaagctgcaatctggagaaagcatcagtcctgaatgtatgatt
tttccattaaaacttgtgttgatgagtgccaccttgcgagtagaagacttcatttcccaa
aggctattttttacacagccacctgttatagaagttcctacaaggcagtttccagtgaca
gtacacttctcaaagaaaacagaaattgttgattatgttggtcaagcatataaaaaagtt
ttagcaattcacaagagattgccacatgggggcatacttgtcttcgtcaccggacagagg
gaagtagagtacttgtgcaagaagctacgtagagcttcaagggatctgatccttaaaaat
tctaagaggactatagaaaatgatggtactatgatctctgaagcgaagactattgagggg
ataaatatgacagagataaatgaagcatttgaagttcatggaaattcagcccaccagcaa
actgataggtttagctcttatgatgaaggttatagtgatgagcatgaggataaatccgat
gtttcttatgattcagaaacagagagtgaactagaagtttctggcgatgatctagagcta
ttccatcatgaacaccaagagaaaaatgataatcttgttttaggagaggatggaacactt
gcttcactgaaggcttcttttgaagcattatctgggaaaactgaattaaactccaacatt
gatgagaagcagactcctcctcctagcacagaagaatgtttagagcaatcaaaaacttgc
acagagaagagtatcagaggagatagtggttcctgtcctggtggcctctatgttctgcct
ctttatgcgatgctacctgcagcagcccagcttcgtgtatttgaagaagtcaaggaggga
gagaggctagttgttgttgcaactaatgttgctgaaacctctctaactattccaggaata
aagtatgttgttgacactggaagagaaaaagtaaaaaattacaactcctctaatggtatg
gaaacgtatgaagtacagtggataagtaaggcatcagctgctcaacgtgcgggaagagcc
ggaagaactggtcctggccattgttaccgtctttattcttctgcagtcttcactaacgta
ctacctggtttctctcttgctgaaatttctaaagtacctgttgagggtgttgtccttctc
ttaaagtctatgcgtattaaaaaggttgtaaatttcccatttccaactcctcctaaagat
gcggccctggttgaagcagagaattgcttgaaggctcttgaagcacttgatagccatggg
gaacttacactagtggggaaagccatggctcaatatcccttgagtccccgtcactctagg
atgctcctcactgttattaagactataaggcatgagctcaattgcagtagagcaagtcta
attctagcatacacggttgcagcagcggcggcattgagcttgtcaaatcctttcctcatg
gagtttgaaggaagtaatacaaatagcaatgaatcaagggtgcacgaggaatctagtgtg
agagacaatgagaaagtcagagacaaacaagaaaagattaggaaaaagaaactaaaagaa
actgcaaaagttgcccgtaaaaagtttcgcaatcttactagtgatgccttaactgtagct
tatgccttgcagtgttttgagtgttcacagagcccagtggaattctgcaatagctatgct
ttacacctaaaaaccatggaggaaatgtccaagcttaaacagcagctacttaaactggtc
ttttatcatagtgttggtggtgttgaacagtactcgtggcatcatggaaatctagaggat
gtagaacatgcttggagagcttcttctgaaaagtatcctctttcactagatgaggaagtg
ctcatacgccaagcaatttgtgctggatgggcagataggattgccaagcgtatcacagta
acttcaaggtcctctgatggggatataaaagctcgtgctgtccggtatcaatcttgcatg
gttgaagaaattgtgttcctccatcgatggtcatctgtttctattgcagcacccgagttt
ttggtgtacaacgaactgctacaaacaaaacgaccctacatgcatggagtgactagtgtg
gaagcatcttggcttgttgattatgctagatcttcatgcactttctctgcaccactcaca
gatcccaaacctttttatgatgctcaaacagatcaagtgaaatgttgggttgtgccaaca
tttgggcgtttttcatgggaacttccaaagcatgctttgcctattatcgatgttgaacat
cgagcacaagtgtttgcatatgctttccttgaaggccaagtgtgcccctgcttaaaatct
gccagggaatttatggcagcacctcctgaaagcattttgaagagagaagctttaggtcaa
aaaagggttgggaatcttcttagtaagctgaaagtagaatcaatcgacagccgtgccaag
ttgacaatggcgtggaagaagaatccttgggttttgtattcagaagtgttggactggttt
cagaaaagtttccaaaagcactttcgcgagcgtttttggttaccaatgcatggggaagtc
tttatagagcctcaacaaaccttttctccaaaggtgaagagacaattgaaaggaaaggct
aaactgcctaggtga
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