Quillaja saponaria (soapbark tree): O6P43_018297
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Entry
O6P43_018297 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_018297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_018297
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_018297
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_018297
Spliceosome [BR:
qsa03041
]
Complex A
U1 snRNP components
U1 related factors
O6P43_018297
Complex B
O6P43_018297
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_018297
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
KAJ7963167
LinkDB
All DBs
Position
7
Genome browser
AA seq
505 aa
AA seq
DB search
MSRYDSRSTDPTSYRDRRSDSGIGASTGYGGSVGSSSSRGDYDGAELPRKLDLDGLTHFE
KNFYRESPAVAAMSEEEVDEYRLRREITVEGRDIPKPVKSFDDIGFPDYVLQEVTKAGFV
EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLILAP
TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESN
HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVNQIRPDRQTLYWSATWPKEVEQLARKFLY
NPYKVIIGSPDLKANHAIRQYVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDHV
TRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDIKYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITVLEEAGQKVSPELATMGRG
APPPPSGHGGFRDRGRGYGGGRTWS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttacgatagtcgctccaccgaccccacttcctaccgtgaccggagaagtgat
tcggggattggtgcatctaccggttatggtggttctgtcggatcctcatcgagcagggga
gattatgatggtgccgagttaccacggaagttggatttggatgggttgacacattttgaa
aagaatttctatcgtgaatctccagcggtggcagcaatgtcagaggaggaggttgatgag
tatcgtctgcggcgggaaataactgttgaaggtcgagatattccaaaacctgtcaagagc
tttgatgacattggctttccagattatgttctgcaagaagttacaaaagctggttttgtg
gaacctacaccaattcaatctcaaggttggccaatggctttgaagggccgtgacctcatt
ggtatcgccgaaacaggatcagggaagacacttgcctacttgttgcctgcaatagtgcat
gttaatgcccaaccaattcttgctcctggagatggcccaatcgttttaattttggcccca
actcgtgaacttgctgttcaaatacaacaagaggctactaaatttggtgcatcatcaaag
ataaagaatacctgcatttatggtggggttccgaagggacctcaggtgcgtgaccttcag
aaaggggttgaaattgtaattgccaccccagggaggttaattgatatgctggagtcaaat
cataccaacttgcggagggttacataccttgtcttggacgaggctgatcggatgctagac
atgggatttgatccgcagatacggaaaattgttaatcagatacgcccagaccgtcaaact
ttatactggagtgctacctggccgaaggaggttgaacaattggcaagaaagttcctgtat
aacccttacaaagtaattattggttctccagacctgaaggctaaccatgccatacgccaa
tatgttgacattgtttctgaaaatcagaaatataataaattagtgaagttactggaggac
atcatggatggtagccgaatactgatattcatggataccaagaaaggatgtgatcatgtc
actcggcaactccgcatggatggttggcctgctctttcaattcatggagacaaaagtcaa
gcagaaagggattgggtgctctcagagttcaaatctggcaagagtccaataatgactgca
acagatgttgcagctcgaggtttagatgtgaaggatataaaatatgtgataaattatgac
ttccctggatctcttgaagactatgttcaccgcattggtcgaactgggagagctggggca
aaaggaactgcttacacattctttacggctgctaatgccagatttgcaaaggaacttata
actgtacttgaggaagctggacagaaggttagtcctgagttggcaacaatgggtcgcgga
gcacctcctccgccttcaggtcatggtggtttccgagaccgtgggaggggttatggtggt
ggtcgaacttggagctaa
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