Quillaja saponaria (soapbark tree): O6P43_018423
Help
Entry
O6P43_018423 CDS
T09778
Name
(GenBank) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_018423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_018423
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_018423
mRNA degradation factors
5'-3' decay
Lsm complex
O6P43_018423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-ProteinID:
KAJ7963308
UniProt:
A0AAD7LS97
LinkDB
All DBs
Position
7
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIRRAQKAEREATDLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggcaggcccggaggatatctacctttctacttcacttgctagttatcttgac
aggaaacttcttgtattgctgcgtgatggtcgaaagctcttgggtacacttcgttctttt
gatcaatttgctaatgctgtactcgaaggtgcttgtgagagggttattgttggtgaactt
tattgcgacatccctttgggtctgtatgtaatccgtggagaaaatgttgttttgattggc
gagctggacttggagagggaggaacttcccccgcacatgacacgtgtttcagcagcagaa
attagaagggcacagaaagcagaaagggaggctacagatctgaaagggacaatgaggaaa
agaatggaattccttgatttggattag
DBGET
integrated database retrieval system
