Quillaja saponaria (soapbark tree): O6P43_018504
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Entry
O6P43_018504 CDS
T09778
Name
(GenBank) Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_018504
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
O6P43_018504
microRNA pathway
RISC loading complex
O6P43_018504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
dsrm
PAZ
DND1_DSRM
DEAD
ResIII
Helicase_C
Dicer_dsRBD
Dicer_PBD
SNF2-rel_dom
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7963397
UniProt:
A0AAD7LSK3
LinkDB
All DBs
Position
7:26010989..26023018
Genome browser
AA seq
1986 aa
AA seq
DB search
MEDPTTVTGVDGACDPITRSPPSYWLDACEDLSCDFIDFGADSIVPEHVDNPVNQEGDFF
GGIDHILDSIKNGGGLPTVSENNSNVTANGIQVGETCLNDDASGFCKVPVGSPIARSNGT
HKDNLEKNGQVGEKFDYGSEIFNRSEADNNGNKLSNGHGEGRLSICSPKENGAHGQQNRG
SELLRERDVDGEERCSKRARISNYTNERHYSGKLNYNPKDRERCSSRKRLRDWDEIDRRD
KDTIRRREYYSNCNRRDGRDRDRRDREPKGYWERDKSGSTGMVFRLGAWEAVHNREGKVA
NDINQEFNGRSEKKLEERKERLPEEQARQYQLEVLEQAKKKNTIAFLETGSGKTLIAILL
IKSVFNDFQKQNKNMLAIFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQ
REFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPR
DKRPCVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVV
VEYDKAASLCHLHEQIKQMEVDVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERT
ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSRL
VSLLHCQLSEGAVSDKDRNVDGSECGATHDGFEPDEIEEGELPDSHVVSGGEHVDAIIGA
AVADGKVTPKVQSLIKILLNYQKTEDFRAIIFVERVVSALVLPKVFAELPSLSFIKSATM
IGHNNSQEMRTCQMQDTIAKFRDGRTTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI
QSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV
DTKPGAVYQVESTGAVVSLNSAVGLVHFYCSQLPTDRYSILRPEFTMERHEKPGGPTEYS
CKLQLPCNAPFENLEGPVHSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREKN
EENDEGDPLPGTARHREFYPEGVADILKGEWILSGQDVCKSSKLLHLCMYDVKCVNIGSS
KDPFSTQVSDFAVLFGNELDAEVLSMTMDLFIARTMTTRASLVFRGSIEVTESQLASLKS
FHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVVGDKSVDTKKQIDWDLVENIIGTDAWSN
PLQRARPDVYLGTNERTLGGDRREYGFGKLRLGMAFGQKSHPTYGIRGAVAQFDVVKASG
LVPNRDGVEVQKHVDLTTKCKLMMADTSTSAEDLIGKIVTAAHSGKRFYVDSIRYEMTAE
NSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYKQQPLIRGRGVSYCKNLLSPRFEQTEGE
SEEAHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDLIHFPVPA
SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNM
ILYQYALSKGLQSYIQADRFAPSRWASPGVLPVFDEDTKDEESSLFDQDGSIGKTDWISH
VDGYEDDELEDGELESDSSSYRVLSSKTLADVVEALIGIYYVEGGKTAANHLMKWIGIEV
EFDPKEIECRRKPSDVPDTVLRSVDFNALEGVLNMKFKDRGLLVEAITHASRPSSGVSCY
QRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHMHLRHG
SSALEKQIKEFVKEVQNELLKPEFNSFGLGDCKAPKVLGDIVESIAGAIFLDNARDTTMV
WKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVFIDGVQVGA
AQNSQKKMAQKLAARNALAALKEKEAVKAEERKDDENGKKKKNGNQTFTRQTLNDICLRR
NWPMPSYKCVNEGGPAHAKRFTFSVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLEL
LNKLYS
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccgactacggttactggtgtggatggtgcttgcgacccaataactcgttca
cccccttcatactggctggatgcctgtgaagacctatcctgcgatttcattgattttggt
gccgattctatcgttccagaacatgttgataaccccgtgaatcaggaaggtgacttcttt
ggtggaattgatcacattctcgatagtataaagaatggtggtggtctcccaactgtcagc
gagaacaattccaatgtcactgcgaatggaattcaagttggggaaacatgtttgaatgat
gatgcatctgggttttgtaaagtaccagtgggaagcccaattgctcgatccaatggcacc
cacaaagataatttagagaaaaatgggcaggtgggtgagaaatttgactatggcagtgaa
atttttaaccgttctgaagctgataataatggaaataagttgtcaaatggtcatggagaa
gggagattgtcgatttgttctcccaaggaaaatggagctcatggacaacagaataggggt
agtgagctgttgagggaacgggatgttgatggtgaagaaagatgcagcaaaagggctagg
attagcaattacacgaatgagaggcattattcaggaaaattaaattataaccccaaggac
agggagagatgttctagtaggaagaggctgcgcgattgggatgagattgataggagggat
aaggatactatcaggagaagagaatattatagtaactgtaataggagggatggtagggat
agggatcggagggacagggaaccaaagggttattgggagagggacaagtcaggttccact
gggatggtttttcgcttgggcgcttgggaagctgttcataatcgagaggggaaggtggcc
aatgatattaaccaggaattcaatggaaggtctgagaagaagttggaggagcgtaaagaa
agacttcctgaggaacaagctcgacaatatcagttggaggttcttgagcaggctaagaaa
aaaaataccatagcttttctggaaactggatctgggaagacactgattgctattcttctc
attaagagtgttttcaatgattttcaaaagcagaataagaatatgcttgcaatattttta
gtcccaaaagttccacttgtttatcagcaagcagaagtgattcgggagcgcactggttac
caggtcggccattattgtggagaaatggggcaggatttctgggatgcgagaaggtggcag
cgcgagtttgaaacgaaacaggttttagtcatgacagctcaaattcttttgaacattctg
aggcatagcataattaaaatggaagcaatcaatctcctaattctggatgagtgccatcat
gctgtgaagaaacatccatattcacttgtgatgtctgagttctatcatacaacacccaga
gataagagaccatgtgtatttggaatgactgcttctcctgttaacttgaagggtgtctcc
agccaggtagattgtgctataaaaattcgcaatcttgaaagtaagctcgattctatagtt
tgtactataaaagaccgtaaggagctggaaaaacatgtaccaatgccctcagaagttgtg
gtggagtatgataaagcagccagtttatgtcatcttcatgagcagataaagcaaatggaa
gtggatgttgaagaagctgcaaaatcaagttcaagaagaagtaaatggcagtttatggga
gctagggatgctggggccaaggaagagctgcgacaagtttatggtgtttctgaaagaaca
gaaagtgatggagctgctaatttaattcagaagttgagagctatcaattatgcactaggt
gaactgggtcagtggtgtgcctacaaggtagcacaatcttttttgactgcactacaaaat
gatgagagggcaaactaccaactcgatgtaaagttccaagaatcctacctgagcagactt
gtctctctcttgcattgtcaactgtcagagggtgcagtttctgacaaggacagaaatgtt
gatggctcagaatgtggggcaacccatgatggttttgaacctgatgagattgaggaggga
gagcttccagacagtcatgttgtctctggtggggagcacgtcgatgccataataggagct
gctgtagctgatggcaaagtaacacccaaggtgcagtcactgatcaagatacttctcaat
tatcagaagacagaagacttccgtgcaatcatctttgttgagcgggttgtgtctgcctta
gttctgccaaaggtctttgcagaacttccatctctaagtttcattaagagtgcaaccatg
ataggccacaacaatagtcaggaaatgcggacatgccaaatgcaggatacgattgccaag
ttccgggatggtcggaccacgttgttagttgccactagtgtggctgaggaagggctggac
atacggcaatgtaatgttgttattcgctttgaccttgcaaagactgttttggcatacatt
cagtctagaggtcgtgccaggaagcctggctcagattatatcctgatggttgagagaggc
aatttgtcgcatgaagcattcctgaggaatgcccggaacagcgaggagaccttgaggaaa
gaagcaatagagagaactgaccttagtcatcttaaagacacttcaagattgatttcagta
gatactaagcctggagcagtttaccaggtggagtcaactggtgctgttgtgagcttaaat
tctgctgtaggtcttgtccatttctactgctctcagctacccactgacaggtattcaatt
ctccgtcctgagtttaccatggagaggcatgaaaagccaggaggtcctactgaatattca
tgcaagcttcaactaccttgcaacgcaccatttgaaaatcttgagggtcctgttcacagt
tcaatgcgccttgcacaacaggctgtttgcttggctgcttgcaaaaagctccatgagatg
ggagcattcactgacatgctattgcctgacaaaggaagtggggaagaaagagaaaaaaat
gaagagaatgatgaaggagacccacttcctgggactgctaggcacagagagttctatcct
gaaggtgtagctgacattcttaagggagaatggatcttatctggacaagatgtttgcaag
agctctaaattgcttcatctttgtatgtatgatgttaagtgtgtaaatattggttcttca
aaggatcccttctctactcaagtgtcagattttgctgtactttttggcaatgagctggat
gcagaggtgttatcgatgacgatggatctgtttattgctcgaaccatgactacaagggca
tctcttgtcttcagaggatcgatagaagtcactgagagccagttggcatcccttaagagt
tttcatgtgagattgatgagcattgtcctggatgtggatgttgaaccttccaccactcct
tgggatcctgcaaaggcatatctatttgttcctgtggttggcgataagtctgtagatact
aaaaaacaaattgactgggatctggttgagaacataattggaacagatgcatggagcaat
ccacttcagagagctcggccagatgtttaccttggcacaaatgagagaacactaggtgga
gatagaagagagtatggatttggaaaattgcgtcttggcatggcttttgggcaaaaatcc
catccaacatatggaatcagaggagctgtggcacagtttgatgttgtgaaagcttctgga
ttggttcctaaccgggatggtgttgaagttcaaaagcatgtggacttgaccaccaaatgt
aaattgatgatggcagataccagtacttctgctgaggatctgatagggaaaattgtaaca
gctgcacactccgggaagaggttttatgtggattccatacgctatgagatgacagcggag
aactctttcccaaggaaagaaggttatcttggtcctttggagtacagctcctatgctgat
tactacaagcaaaagtatggagttgatctgatctataagcagcaacctctcataagagga
cgtggtgtatcatattgcaagaatctcctgtcccctcgatttgaacaaactgaaggtgaa
tctgaggaggctcatgataaaacgtattatgttttcctccctcctgagttgtgtttagta
cacccacttcctggatcacttgttcgtggtgcccaaagattgccctcaataatgaggcgg
gttgaaagtatgctacttgcaattcagcttaaggatttgatacattttcctgtccctgct
tcaaagattttggaggccttgactgctgcctcatgccaggagacattctgttatgagagg
gctgagcttctaggagatgcgtacctcaaatgggttgttagtcggtttcttttccttaaa
tacccacagaaacatgagggtcagcttacaaggatgaggcaacaaatggttagtaacatg
attttgtatcagtatgctttgagtaaaggacttcaatcatatatccaggcagatcggttt
gctccatcccgctgggcttctccaggggtgctacctgtatttgatgaggataccaaggat
gaagaatcatccttatttgatcaggatggatctattggtaaaactgattggatcagtcat
gttgatggatatgaggatgatgagttggaggatggtgagcttgagagtgattcaagttct
tacagagtcctgtctagcaagacacttgcagatgttgttgaagcacttattgggatatat
tacgttgaaggtgggaagactgctgctaaccacctcatgaaatggattggcattgaggta
gagtttgatcctaaggagatagagtgcagaagaaaaccatccgatgttccagatactgta
cttaggagcgttgactttaatgccttagaaggtgttttgaacatgaagtttaaagacagg
ggactactggtagaagctattactcatgcttcaagaccatcttcaggagtatcctgctat
cagcgattggagtttgttggtgatgcagtcttggatcatcttattacaaagcacttgttt
ttcacatacacagatctcccgcctggccgactgactgaccttcgagctgctgctgtgaac
aatgaaaattttgctcgtgttgctgttaaacataatcttcatatgcatcttcggcatggg
tctagtgccctcgaaaaacagattaaagaatttgtgaaggaagttcaaaatgaattgtta
aagccagagttcaattcctttggtttgggagattgcaaagctcccaaggtccttggtgat
attgtcgaatctattgctggtgccatttttctcgacaatgcgcgtgatactaccatggtt
tggaaggtttttcagccactgttgcatccaatggttacaccagagacgcttccaatgcac
ccagtccgtgagctgcaagaacggtgccagcagcaagctgaaggtttggagtacaaagct
agtcgaagtggcaacttggccaccgttgaagtcttcattgatggtgttcaggtaggagct
gctcaaaactcacagaagaaaatggcacaaaaactagctgccaggaatgcacttgctgca
ttgaaagagaaggaagcggttaaagctgaggaaagaaaggatgatgaaaatgggaagaag
aaaaagaatggaaaccagacattcaccagacaaacattgaacgatatctgtttacgaaga
aattggcccatgccatcctacaagtgtgtgaatgagggtggcccagcacatgcaaagagg
tttacattctcggtacgtgttaatactactgatagaggatggactgatgaatgtgtggga
gagccgatgccgagcgtcaagaaggccaaggactctgctgctgttcttctcttagaacta
ttgaacaaattatactcatga
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