Quillaja saponaria (soapbark tree): O6P43_018633
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Entry
O6P43_018633 CDS
T09778
Name
(GenBank) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_018633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_018633
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
O6P43_018633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-ProteinID:
KAJ7957814
UniProt:
A0AAD7LGK7
LinkDB
All DBs
Position
8
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AA seq
261 aa
AA seq
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MDEEHGTSGSNGGNLETSKAERSVWLMKCPPVVAKSWQSQPPSRPHPVAKVVLSLDPLCA
DDPSALQFSMEMTDTEGGNLPKSYSLNMFKDFVPMCIFSEANQGKVVMEGKVEHKFDMKP
HGENIEDYGRLCRERTNKSMIKNRQIQVIDNDRGVYMRPMPGMVGLISSTSKEKRKTQPV
KQSDTKRTRRDRNQLQDIMFKLFERQPNWALKQLIQETDQPAQFLKEILNELCVYNKRGA
NQGTYELKPEYKKSVEDTNAE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagcatgggaccagtgggagcaacggcggtaacttggagacatcaaaggcc
gagagatcggtgtggcttatgaagtgcccgcctgtggtggccaagtcttggcagagtcaa
cctccttcacgccctcaccctgtggccaaggttgtcctctcccttgatcctctttgcgca
gacgacccctctgccctccagttctcaatggagatgacggacaccgagggtggcaatctt
ccgaagagttattctttgaatatgtttaaagattttgttcctatgtgtatcttctctgag
gcaaaccaaggcaaggttgtgatggaagggaaagtggaacacaaatttgacatgaagccc
catggggaaaacatagaagattatggcagattgtgtcgtgagaggaccaataagtctatg
attaaaaataggcaaatacaggtcattgataatgatcgtggagtttacatgaggcccatg
cctggaatggttggtttaatttcttcgacttccaaggaaaagaggaagacacaaccagtt
aaacaatcagatacaaagagaacaagaagggatcgtaaccaattgcaggatataatgttc
aagctattcgaaagacaaccaaattgggccttgaagcagctaattcaagaaaccgatcaa
cctgcgcaattcttgaaagagatactgaatgagctgtgtgtgtacaataaaaggggtgcc
aaccaaggaacttatgagcttaagcctgaatacaagaaatctgttgaagatacaaatgct
gaataa
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