KEGG   Quillaja saponaria (soapbark tree): O6P43_018938
Entry
O6P43_018938      CDS       T09778                                 
Name
(GenBank) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
qsa  Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:qsa03009]
    O6P43_018938
Ribosome biogenesis [BR:qsa03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    O6P43_018938
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR54 Beta-prop_SPT8 Beta-prop_BBS7 Beta-prop_SCAP Beta-prop_EIPR1 WD_LRWD1 Nucleoporin_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 PROPPIN Ge1_WD40
Other DBs
NCBI-ProteinID: KAJ7958170
UniProt: A0AAD7PKK0
LinkDB
Position
8
AA seq 428 aa
MEVVVASSSTDAGIGCWELTTGAEQLRYKSCASPPHGLVCVGGRFLASSQLRESSASSGS
ILYWSWSKPQVDVKSFPAEPIKPLAANHQGTYVVGGGLSGNIYLWEVASGRLLKKWHAHY
RAVTCLVYSEDDSLLISGSEDGSVRVWSLFMIFDDYLSQEANHLYEHSFSEHTLRVTDVV
IGYGGWNAIIVSASEDRTCKVWSLSRGKLLRNIVFPSIIDAIALDPAEHVFYAGSRDGKI
FITALNAESSSSKNYGLHIISSLSNHSKAVTCLTYGTSENLLLSGSEDGMIRVWDTRTHN
IVRVLRHAKGPVNNILVIRQQLKFNYGMSPNLQASTRKQGSLLPPPLEKYANSTDEDSGV
EFVVGNPAGSIPRNASYITSHVMADQIKQLQYQGSAAAAEMEVERLKLDCKKSIEMNNKW
KKMYENLA
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggaggtggtggtggcatcttcttctaccgacgccggcatcggctgctgggagctcaca
acaggggctgagcagctccgttacaaatcttgcgcttctccgccgcatggcctcgtatgt
gttggcggtcggtttcttgcttcctctcagcttcgagaatcatccgcctcctccggctcc
atcctctattggtcctggtccaagcctcaagtagatgttaagagctttcctgctgaacca
attaaaccgctcgctgctaatcaccaaggcacttacgtagttggtggtggtttatctggg
aatatttacctgtgggaggttgcaagtggcagattgcttaagaagtggcatgctcattat
agggctgttacttgcttggtatattccgaagatgactcgttgctgatatccggttcagaa
gatggatctgttagagtttggtcccttttcatgatatttgacgactaccttagtcaggaa
gcaaatcatctatacgagcatagcttttcagagcatactctgcgtgtaactgatgttgtt
attggttatggagggtggaatgcaattatagtgtcagcttctgaggacaggacgtgcaag
gtatggagcttatcaaggggaaaattattaagaaatatagtattcccttcaattattgat
gcaattgcactagaccccgctgaacatgtcttttatgctggcagcagagatggaaaaata
ttcattaccgcacttaatgctgaaagctcctcaagtaaaaattatgggttgcacatcatc
agctcattatcaaaccacagcaaggcagttacttgcctaacatatggtacaagcgaaaat
ctattattatctgggtcagaggatggaatgattcgtgtgtgggacaccagaactcataac
attgttcgtgtgctgagacatgcaaaaggtccagtgaataatattcttgttattagacaa
cagcttaagtttaattatgggatgtctccaaatctgcaagcttccacaagaaaacagggg
tctttattaccccctccattggaaaaatatgcaaattcaactgatgaagattcaggtgtt
gagtttgttgttggcaatccagctggcagtatacctagaaatgcttcatacatcacttct
catgtgatggctgatcaaattaaacaacttcagtatcagggttctgctgccgcagctgaa
atggaggtggagagattaaagcttgattgcaaaaagtcaattgaaatgaataacaagtgg
aagaaaatgtatgaaaaccttgcatga

DBGET integrated database retrieval system