Quillaja saponaria (soapbark tree): O6P43_019028
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Entry
O6P43_019028 CDS
T09778
Name
(GenBank) U3 small nucleolar RNA-associated protein 4
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
O6P43_019028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_019028
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
O6P43_019028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR41
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR54
Motif
Other DBs
NCBI-ProteinID:
KAJ7958273
UniProt:
A0AAD7PJU0
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Position
8:complement(2558312..2564525)
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AA seq
785 aa
AA seq
DB search
MLEAYRTSSVDWRPSPVVALATSIDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGDP
NSRVSSLVWCRGASKGMSCGRLFSSSIDGSVSKWDLFHLKQKTVLDSVGVSIWQMAVEPS
NSDLINTESTSKSSDSDEDETSDGEYDSDIPEAHKQSVIEHPRVAIGCDDGCVRIYSISD
LDEFIYTKSLPRVSDATFLYSGSSDGLIRCWNVKLGHEIYRITAGLGGAGSRPELCIWSL
LSLRSGMLVSADSSGSVQFWESQHGTLMQAHSLHKGGVNALAAAPSHNRVFSAGSDGQVI
LYKLSSQSVSSDGDKSLKVMKKWNYVGYVKAHTHDIKALTVAVPISREAPLADEKTKRIR
HKEKPIKFSYHKWAHLGVPMLISAGDDTKLFAYSAMEFSKFSPHDICPAPQRLPIQLVLD
TDFNQSMLLIQASNWLDIVSVRTKNGAIPNMTSHTVGGLATTTLLARVKTKGSQKIVCSG
ISYSGVFFAYSDHVKPSLFELKRCEGKNTWAVSKRLLPPKIPFAHSMIFSCDSSRLMIAG
HDRRIYVVDVGSSELLHTFTPCRELYDEELPPTEPPITRMITSSDGQWLAAVNCFGDIYI
FNLEILRQHWFISRLDGASVTAGGFPPQDNNVLIITTSSNQVYAFDIESKQLGEWSMKHT
FVLPKRFQEFPGEVIGLSFTPSSSSSLVVIYSSRAMCLIDFGIPVDRDDMRNLQHILANG
RLKRKLRDGQTETKFRKNFEFFYFQDPVLFLAHLSKNSSLIVDKPWLEVIKGLEAPPVHR
HIFGT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagcttacaggaccagctcagtagattggagaccgtctccagtagtagcccta
gccactagcatcgacgactctcaggtcgctgctgctcgtgaagatggctcgctggagatt
tggctcgtctctcctggctcagttggctggcactgtcaattaacgatacatggagatcct
aattcaagagtttcttcacttgtatggtgtcgtggtgcttcaaaaggcatgtcttgtggt
cggttgttctcatctagtatagacggctcagtttcgaagtgggatcttttccacttgaag
cagaagactgtgctagattcagttggtgtctcaatctggcagatggctgtggaaccttct
aacagtgacttaattaatacagaatccacgtctaaatccagtgatagtgatgaagacgaa
accagtgatggtgaatatgattctgacatacctgaggctcacaagcaatctgtcattgag
catccacgtgtagcaattggttgtgatgatggttgtgtgcgaatttacagcatctctgac
ttggatgaatttatatatactaaatccttgcctagggtcagtgatgcaactttcttatac
tcaggaagcagtgatgggttaataagatgctggaatgttaaactaggtcatgagatttat
aggataacagctggacttggaggtgctggcagcagacctgagctttgcatatggtcacta
ctctctctgagatctgggatgcttgttagtgctgacagcagtggtagtgttcaattttgg
gagagccagcatggaacccttatgcaagcacattcattacacaagggtggtgtaaatgct
ctggcagctgcccctagtcataaccgggttttctcagctggctctgatggtcaggttatt
ctctataagctctctagtcagtcggtgtcttccgacggtgacaagtctctaaaagtgatg
aagaaatggaactatgttggttatgttaaagctcatacacatgatatcaaggccttaact
gtggctgtaccaattagtcgagaagcccccttggctgatgagaagacaaaaagaattcga
cataaagaaaagccgataaagtttagctaccataagtgggcacatttgggggttcccatg
ctcatctcagctggtgatgatacaaaactttttgcctactctgcgatggaattttccaag
ttctctcctcatgatatttgccctgcacctcaaagattacccatccaactggtgcttgat
actgatttcaatcaatcaatgcttctaatccaggcttcgaattggttagatattgtttct
gtgcgaacaaaaaatggtgccattccaaatatgacgagtcacactgttgggggtcttgca
acaaccacactgcttgctcgagttaagactaaggggtctcaaaagatagtttgcagtggt
atttcttattcaggggtgttctttgcttattccgatcatgtgaaacctagtttatttgaa
ttgaagaggtgtgaaggaaagaacacatgggccgttagtaaaaggctactccctccaaaa
ataccatttgcccattctatgattttcagttgtgattcttctcggttgatgatagcaggg
catgatagaaggatatatgttgtggatgtgggaagctcagaactactacacacctttacg
ccgtgccgtgagttgtatgatgaggaattaccgcctactgaacctcccataacaagaatg
attaccagctctgatgggcagtggttagctgctgtgaactgctttggagatatatacata
ttcaatctggagatactaaggcagcactggttcatttcaagattggatggtgcctctgtt
actgctggtggttttccaccacaggacaacaatgtccttattatcacaacctcttcaaat
caggtgtatgcttttgacatagaatccaaacaattgggagaatggtcaatgaagcataca
tttgttctgccaaagagattccaagaatttcctggggaggttattgggctctccttcaca
ccctcctcaagttcatctttggttgttatctatagctccagggctatgtgcttgattgac
tttgggatacctgtggatcgcgatgatatgagaaatttacaacacatacttgctaatggg
agactgaaacgtaagttgcgagatggtcaaacagaaactaaattcagaaaaaacttcgaa
tttttttatttccaagatcctgttttgtttttggcacatctctcaaaaaattcctcccta
atagtagacaaaccgtggctagaggtaattaaaggtttggaggctccacctgtccataga
catatttttgggacataa
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