KEGG   Quillaja saponaria (soapbark tree): O6P43_019216
Entry
O6P43_019216      CDS       T09778                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O6P43_019216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsa03021]
    O6P43_019216
Enzymes [BR:qsa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O6P43_019216
Transcription machinery [BR:qsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     O6P43_019216
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF2002 CFAP77
Other DBs
NCBI-ProteinID: KAJ7958492
UniProt: A0AAD7LIC6
LinkDB
Position
8
AA seq 1185 aa
MGASTDFKEDRRQYSNGFDMDSDDDDEFTNSTSIHDLGSDFLTNLCKDASISFFNEYGLI
SHQINSYNDFIKNGLQKVFDSFGEMTVEPGYDPSKKGEGEWRYASVKFGKVTLEQPKFLG
GEGKEYNMLPRHARLQNMTYSSRMKVNVHVQVYTQQLVKSDKFKTGTDQFLDRNIINEDN
RDIIIGRIPVMVKSDLCWMKEVEKGDCDFDHGGYFLIKGAEKTFIAQEQICLKRLWILNN
QGWTVSYKSLMKRNRLIVKLVGIPKIEDIKGGEKVLTVYLLSAEIPIWVLFFALGVSSDR
EVIDLIDYTGDDASISNILFASIRDADEKCDGFREGKKALNYVDKQVKSSRFPPVESIEE
CLSLYIFPGLKGLKQKARFLGYMVKCLFLAYTGRRKCDNRDDFRNKRLDLAGELLERELR
VHTAHARRHMAKVLQRDLYGDRFVRPIEHYLDASIITNGLSRAFSTGAWSHSFKKMERIS
GVVATVGRANPLQTLVDMRKTRQQVLYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLIK
NLAITGLVTTNTYEPVVPQLFDCGMEELVDDTSTSLCGKDKVFLNGDWIGVCRDSHSFVM
ELRNKRRQKELHHQVEIKRDELQGEVRIFSDAGRILRPLLVIGNLHKLKSFKEEVKASKR
KQYFFPSLLDLGVIELIGPEEEEDCHTAWGIRKLFVEGKGKPSVEYTHCELDMSFLLGLS
CGIIPFANHDHARRVLYQSQKHSCQAIGFSTTNPDIRVDTLSHQLQYPQKPLFRTMISDC
LGKEPKPEYFNGQNAIVAVNVHLGYNQEDSLVMNRASVQRGMFRSEHVRSYKAEVGNKES
LEKKKKAEETINFGKIQSKIGRVDSLDDDGFPYIGANLQSGDIIIGKCADSGADHSIKLK
HTERGYVQKVVLSSSDEGKNFAVVSLRQVRSPILGDKFSSMHGQKGVLGFLESQENFPFT
VQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMRHATPFSTLSVDAITDQLHRA
GFSRWGNERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR
KRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNISNVILRSASSGRK
IRGPYCRICESADDIVKVNVPYGAKLLCQELFSMGINLKFETRLC
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgggcgcatcaacagatttcaaggaagatagaagacagtattcaaatgggtttgatatg
gattcagatgatgacgacgagtttactaattcaactagcatacatgacctggggtcggac
tttttgacaaacttatgtaaggatgcctcaatttcattcttcaatgagtacggtctcatc
agtcaccaaataaactcttacaatgacttcatcaagaatggtctccaaaaggtctttgat
tcttttggtgagatgacggttgagcctggttatgatccatcaaagaagggagagggtgag
tggcgatatgcatcggtgaagtttgggaaggtcacccttgagcagccaaaattcttgggt
ggcgaaggaaaggaatataacatgcttcccaggcatgcgcggcttcaaaacatgacatat
tcatccagaatgaaagtgaatgttcatgttcaggtatatactcaacaactggttaaaagt
gacaagtttaagactgggacagatcaattccttgatagaaacattatcaatgaagacaac
agagatatcatcatcggtagaatccccgtaatggtaaagtctgatctgtgctggatgaaa
gaagttgaaaaaggtgattgtgattttgatcatggaggctattttttgatcaagggtgca
gagaagacatttatagcacaagagcaaatatgtttgaagagactttggattttaaataat
caaggttggacagtttcatacaagtcactgatgaagagaaataggttgattgttaaactg
gttgggattcccaaaattgaagatattaaaggaggggagaaggtactcacagtatacctt
ttgtcagctgagatccccatctgggtattgttttttgctcttggcgtctcatcagacaga
gaagttatagatctgattgattatactggtgatgatgccagcatctcaaatatactcttt
gcttctattcgagatgctgatgagaaatgtgatggctttcgtgaagggaagaaagctctt
aattatgtggataaacaggtaaaaagtagcagatttccacctgttgaatctatagaggag
tgccttagtttgtacatttttcctggccttaaaggactaaagcaaaaggcccgctttctt
ggttatatggtgaagtgtcttttcctggcctacactggccgccggaaatgtgataacagg
gatgattttagaaacaagaggttagacttggctggtgagctgctcgagcgggagctgaga
gtacatactgctcatgcacggaggcacatggcaaaggttttgcagagagacctttatgga
gatcgttttgtgcgtccaattgagcactaccttgatgcttccatcatcactaatggtctt
tcaagagcattctcaactggagcatggtcacattctttcaaaaagatggaaaggatttct
ggagtagtggcaacagttgggcgagcaaatccattgcaaactttggttgatatgaggaaa
acacgccagcaggttctgtacactgggaaagttggagatgccagatacccgcatccttct
cactggggtaaggtgtgtttcctctctaccccagatggtgaaaattgtgggcttataaaa
aatttggccatcaccggtctagtaactacaaacacatatgaacctgtggttcctcaattg
tttgattgtgggatggaggaattagtggatgacacttctacttcactgtgcggaaaggac
aaagttttcctgaatggggattggattggagtttgtagagattcccattcatttgttatg
gagctcagaaacaaacgacgccagaaggaattgcatcatcaggttgaaatcaaaagagat
gaactgcaaggagaagtacggatattttctgatgctggaaggattttacgacctctttta
gttattggtaatctgcacaagctgaaatcatttaaagaggaagtgaaagcatctaaaagg
aaacaatacttcttcccctctcttctggacttgggagtgatagagctcattggacctgaa
gaagaagaagactgccacactgcatggggtattcggaaactatttgtggaaggaaagggt
aaaccttctgtagagtacacacattgtgaacttgacatgtcattcttattaggcctaagt
tgtggcatcataccttttgccaatcatgaccatgcaaggagggtactgtaccaatctcag
aagcactcttgccaggccattggtttttcaacaacaaatccagacattagagtggatact
ctgtcacaccagttacagtatccacaaaagcctctctttcggacaatgatttctgattgc
cttggaaaagaaccaaagcctgaatatttcaatggccagaacgcaattgtggcagtcaac
gttcacttagggtacaatcaagaggattctttggtaatgaaccgggcttctgtgcagcgt
ggtatgtttcgatctgagcatgtcagaagttacaaggctgaagttggcaataaggaatca
ttggagaagaagaaaaaagctgaggaaacgatcaattttggaaagatacaaagtaaaatt
ggtcgtgttgacagccttgatgatgatggttttccttatattggtgcaaacttgcagagt
ggtgatattattattgggaagtgtgcagattctggagctgatcacagtataaagctgaag
catactgaaaggggttatgttcagaaagttgtactgtcctcaagtgatgaagggaagaat
tttgctgtggtttctttgagacaggttcgtagcccaattcttggagacaagttctcaagc
atgcatgggcagaagggtgttttgggttttctagaatctcaagagaacttccctttcaca
gtccaagggatagttccagatattgtaataaatccacatgcatttccttcacgacaaacc
cctggtcaactccttgaggctgcattaggaaaggggattgcctgtggtggttcgatgaga
catgccacccctttctccactctctctgttgatgccatcacggaccagcttcatagagct
ggattttcaagatggggaaatgagagggtatacaatggtcgaactggtgagatgctccgc
tctctaatatttatgggcccaacattctaccagcgtctcattcatatggctgaagacaaa
gtaaagtttcgaaatactggtccagttcatccactcacccgacagcctgtggcagacagg
aaacgttttggtggtatcaagtttggtgaaatggagcgtgactgccttattgcacatggt
gcatcagcaaacttgcatgaacgtctctttacactcagcgactcctctcagatgcacatt
tgccagaaatgcaaaaatatctcaaatgtgatcctacggtcagcgtccagtggccgtaaa
ataaggggtccttactgccggatttgtgaatctgcagatgacattgttaaggtcaatgta
ccttatggggcaaagttgttgtgccaagagctttttagcatgggtataaatctgaaattt
gaaaccaggctctgctga

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