KEGG   Quillaja saponaria (soapbark tree): O6P43_019506
Entry
O6P43_019506      CDS       T09778                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03093  RNA polymerase sigma-I factor
Organism
qsa  Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsa03021]
    O6P43_019506
Transcription machinery [BR:qsa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     O6P43_019506
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Raf1_N KIF21A
Other DBs
NCBI-ProteinID: KAJ7958850
UniProt: A0AAD7LIL3
LinkDB
Position
8
AA seq 560 aa
MGLGFRLNLRCEIPIRCSHSFTISPFRPPSSPVRGREVFFNPARLSLLSTLCEEGEISQK
DPLRAYTSSTAVQTLDNDLSEIEEMKMNFRKRSRNGLPEMADGTRMSFEEGSSTSFTSLQ
PFKASHFRLLMENLGVLEGTFADSEAIGLEKDILMQLGKLGALHLFSTCLSRSLKSSNIF
EYSSAHPENIGEHKTNWRMGDHLPKVIIRSGKNERKKFRRERAVNANEVPSQSLLSENTR
EGLLPFPASSVKRISNSKNRRLMVAKNEAEMSKAIKELEKLQSIKEAMEKDTKQVVSLSC
WAEACGVDEKVLQQHLYFGWYCRDELIRSTRSLVLYLARNYRGTGIALEDLLQAGYMGVL
KGAERFDHTRGYKFSTYVQYWIRKSMSRMVARHARGILVPCSLSRAINQIQKARKSFHGT
SIKYPDDNEIAKITGLSLHKIRSASKCLRVVCSIDQKVGDCLAVKYMELTPDTSIKSPEE
AVIKQHMRKDINDLLKGLDSRERQILILRFGLKGYQSKSLEDIGKLFQVSKEWIRRIEKK
ALSKLQNEEIRANLSYYLDP
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgggtctgggttttaggctgaacctcaggtgcgaaattcctattcggtgttctcattcc
ttcaccatttcgcctttcaggcctccttcatctccagtcagaggcagggaagtttttttc
aaccccgcaaggttatcattgctgtcaacgctttgtgaggagggggagatttctcaaaaa
gatcctctgagagcttatacttcatcaacagctgtccaaaccttagataatgatctgtca
gagatagaagaaatgaagatgaactttagaaagaggtcaagaaatggtttacctgaaatg
gctgatggtactcggatgtcttttgaagagggaagttctacttcctttactagcttacag
ccattcaaggcatcacatttccgtttgttaatggaaaacctgggtgttttagaaggaaca
tttgcagattcggaagcaatagggttggaaaaggacatcctaatgcaactagggaagctt
ggagctctacatttattcagtacctgtctatcaaggtctcttaaatcctcaaatattttc
gaatattcttctgcacatcctgagaatattggagagcataagacaaactggagaatgggt
gaccacctgccaaaagttatcattcgctctgggaaaaacgaaagaaaaaaatttagaaga
gagagagcagtcaatgcaaatgaagttccttctcagtcattgctttcagaaaatactcgg
gaaggtcttctacctttccctgcttcatctgtaaaaagaatatcaaatagtaaaaataga
agactgatggttgctaaaaatgaggcagagatgtcaaaagcaataaaggaattagaaaag
ttgcagagcatcaaagaagcaatggaaaaggataccaagcaagtagttagtttgagttgc
tgggcagaagcgtgtggagtcgatgagaaggtgctacagcagcatttatattttggttgg
tattgccgagatgagcttataaggagcactcgttccttagttttatacctggcccggaac
tacagaggtacaggaatagcgttggaagatttgcttcaggcaggatatatgggtgtcctc
aaaggtgcagagaggtttgatcacacaagaggttataaattctcaacctatgtacagtac
tggataaggaaatcaatgtcaagaatggtggcgcggcatgctcggggaatcttagttcct
tgctccttgagcagggcaataaatcagatacaaaaggctcgaaaatcctttcatggtacc
agcatcaagtacccagatgataatgaaattgcgaaaatcaccggtctttctttacataaa
atcagatcggctagcaaatgtctaagagtcgtgtgttcaattgatcagaaagtgggggac
tgccttgctgtgaaatatatggaactaacacctgatacgtcgataaagagccctgaagaa
gctgtcataaagcagcacatgagaaaagacattaatgatctcctgaaaggattggattca
agagaaaggcaaatactaattttgcgatttggtcttaagggttaccaatccaagtctctt
gaggatatagggaagcttttccaagttagcaaggagtggataagacggatagagaaaaag
gctttatcaaagctacagaatgaagaaattcgtgcaaatttaagttattatctggatcca
tag

DBGET integrated database retrieval system