Quillaja saponaria (soapbark tree): O6P43_019523 Help Entry O6P43_019523      CDS       T09778                                  Name (GenBank) Symplekin   KO K06100   symplekin Organism qsa  Quillaja saponaria (soapbark tree) Pathway qsa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:qsa00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     O6P43_019523  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:qsa03021]     O6P43_019523    03019 Messenger RNA biogenesis [BR:qsa03019]     O6P43_019523 Transcription machinery [BR:qsa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      O6P43_019523 Messenger RNA biogenesis [BR:qsa03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      O6P43_019523     U7-dependent histone pre-mRNA processing factors      O6P43_019523 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-ProteinID:  KAJ7958867 UniProt:  A0AAD7LJ33 LinkDB All DBs Position 8:complement(5868117..5893366) Genome browser AA seq 1336 aa AA seqDB search MAGASRDQVLSLLAAANNHGDLAVKLSSLRQAKDILLSMEPSLAADLFSYLVELQSSPES LVRVLLIEVIGEIDLKATGHSPILMSVLLTLLRDGDAIVARQSIVTGTKIFCSVLEELTM QFNLRGKVERWLEEIWTWMAKFKDAVYAVALEPGSVGVKLLALKFLETFVLLFTSDTDTE KPLAEAGIKRSFNISWMVGGHHPVLDPVVLMSEANRTLGILLNLLRSASSLPGSLIITVV NCVAAIARKRPKHYDTVLSALLDFNPNSETVKACHAASIHYSLRTAYLGFLRCTYPSIVE SRERLIRTLRAMNAGDAADQVIRQVEKMIRNSERSSRELRVGKEDQPSSQLPVSGEMIRK RLVPLDDEQLANGHEANSKRIRSGPDAHLPFPVEINDSEQDPFSVNGVSPNVTVLDSQLA AVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVMTNMRHLPMAPPPLTRLGNLP VTRQVGSLSSQVQVVTSSAPVSFVQSSSVTAQVPISSATATNSSMSDTVIAADSKRDPRR DPRRLDPRRVTVTIAEPSVPVVEDIGSMKSEFDDSISLSKPVSYPVMTSNENPLAHLTSK IKGDDKISESPPLCGHDQLMPKDEILEEPEQFDLIPEADENASLDPMLSSIDAVGDDLKT VELSDFVEINREDASCPVESDQYSPAVSVASASEDTSPELPPLPLYVELSEEQENDVKHM AIKHIIESYKHFHGTDFQQTCIVLLARLVAQIDDDNFIMILQKHVLDDQRQKGQELVLHV LYHLHSLMILDSIDKSSSASVLYEKFLLAVAKTLLDSFPASDKAFSRLLGEAPVLPESAM KLLNDLCYSDVVDCHGKFVRDVERVTQGLGAIWSLILGRPQNRQACLDIALKCGVHSQDE IRAKAIRLVANKLYQLSYISEDIEQFATKMLLSALDQEISGANLSLSGSTDQRVEEQIQS QETSISGSQISESTTSDNDSNAKQLLQSSSSLSFPEAQRLISLYFALCTKKPSLLQLVFN SYGKSPRTVKQAFHRHIPILVRALGQSSSELLRIISDPPQGSENLLTLILQTLTQETTPS DELIATIKHLYETKLKDVTILVPLLASLSKSEVLPIFPRLVALPLDKFQMALAHVLQGSA HSGPALTPVEVLVAIHGIVPEKDGLPLKKIMDVCSACFEQRTVFTQQVLAKALNQMADQT PLPLLFMRTVIQAIDAFPKLVDFVMKILSKLVARQVWRMPKLWVGFLKCVSQTQPHSFHV LLQLPPPQLESALNKHAKLRAPLAAYANQPSIKSSLPRSTLAVIGLANEAHMQPPHMSSS FALSDTSSSVHGATLT NT seq 4011 nt NT seq  +upstreamnt  +downstreamnt atggccggagcttccagagaccaagtactctctctcctcgccgctgccaacaaccatggt gacctggccgtcaagctttcatctttgagacaagccaaagatattttattgtcaatggag ccatctttagcagccgacctattctcttacttggtcgagcttcagtcatcccccgaaagc ctcgtacgggtattgctcatcgaggtaattggggagatcgatttgaaagcaactgggcat tctccgatactgatgtccgtactattgacacttctacgagatggtgatgcaattgttgcg aggcaatctattgtcactggcacaaaaatcttttgtagtgttttggaggagctgacaatg cagttcaacctccgtggtaaagttgagaggtggctagaagagatctggacgtggatggct aagttcaaggatgctgtctatgctgttgcattggagcctggttcggtgggagtaaaattg ctggctctgaaatttctggaaacatttgtcttactattcacatctgatactgatactgag aaaccacttgcagaagcaggaataaagcgatctttcaatatctcatggatggttggtggt caccatcctgttctcgatccggttgtgctcatgtcagaagcaaatcggacccttggcatt ctattaaatttgttgcggtcggctagtagtctccctggttctttgataattactgttgtc aattgtgtcgcagcaatagcaaggaagaggccgaaacactatgatactgttctttctgca ctgcttgatttcaatccaaattctgaaacagtgaaagcatgccacgctgccagtatccat tattccttgagaaccgcatatttaggatttctaaggtgcacttatccatctatcgtagag tcaagagagagattgataaggactctacgagctatgaatgctggtgatgctgctgatcaa gttatccggcaagtagagaaaatgattagaaatagtgagcgttcttcacgtgaacttcgg gttggcaaggaagatcaaccatcaagccagctacctgtttcaggggaaatgattagaaaa aggcttgtacctctagatgatgaacagttggctaatggtcatgaagccaactccaagcgg attcgttctggtcctgatgcacaccttcctttcccagttgaaataaatgactctgagcag gatcccttctctgttaatggggtatctccaaatgtcactgtgcttgacagtcaattagct gctgtagaacaaatgattgccatgattggtgctttgcttgctgaaggagaaagaggtgct gaatcactagaaatacttatctcaaagattcatcctgatttgttggctgatattgtcatg accaatatgaggcacttacctatggctccaccacctttaacaaggcttgggaacttgcca gtaactcgacaagtaggttctctaagcagtcaagtgcaggttgtgacatcatctgctcca gtgagctttgtgcaatcatcatctgttactgcccaagtaccaatttcttcagctactgca actaattcatcaatgtctgacaccgttattgctgctgattctaaacgtgatccacgcagg gacccccgtcgcctggatccacgtcgtgtaacggtgaccattgcagagccatctgtacca gttgtagaggatattggatctatgaaatcggagtttgatgattctatttctttgagtaag ccagtttcgtatcctgtcatgacctccaacgaaaatcctctagcacatcttacatccaaa atcaaaggtgatgacaagatctctgaaagtccaccactttgtggtcatgatcaattgatg cccaaagatgagattctggaagaacctgagcaatttgacttgattccagaagcagatgaa aatgcttctctagatcctatgctttcttctattgatgcagtaggtgatgatctgaaaaca gtggagctgtcagattttgttgagataaatagggaagatgcatcatgtcctgtcgaatct gatcagtattcacctgctgtttcagttgcatctgcatctgaagatacctctccagagtta cctccacttccattatatgttgaattatctgaagaacaggaaaatgatgtgaaacatatg gctattaaacatataattgagtcttacaagcatttccatgggacagattttcagcagaca tgtattgtattgcttgctcgattggtagctcagattgatgatgacaattttattatgatc ctgcaaaaacatgtcctagatgaccaacggcagaaggggcaagagcttgtattgcatgtt ttataccatttacattccctcatgatactggattcaattgataaatcttcatcagcttct gttttgtacgaaaagttcctcttggcagtggccaaaacgttgttagactcttttccagca tcggacaaggctttcagtaggcttcttggtgaagcgccagttttacctgagtctgctatg aagcttctaaatgatctctgttattctgatgttgttgattgccatggaaaatttgttcga gatgttgagcgtgtaactcaaggtcttggtgccatatggagtttaatattggggcgtccc caaaatcggcaagcgtgcttagatatagcgttaaagtgtggtgttcattcacaggatgag attcgcgcaaaagctatccggctggtggcaaacaaactttatcagcttagctacatatca gaagatattgagcaatttgcgacaaaaatgttgctgtctgccttagatcaggagatttca ggtgcaaatctttcactttctggatctactgaccaaagagtcgaagagcagattcaaagt caggaaacttcaattagtggttcacaaatttctgagtccacaacttctgataatgactcc aatgcaaaacaactgttgcaaagctcctcatctctgtcgtttcctgaagcccaacgtctg atttctttgtattttgctttatgtacaaagaaacctagtcttcttcaacttgtgtttaat agctatgggaaatccccaagaaccgttaagcaggcttttcatcgtcacatccctattctt gtaagggcattaggacaatcttcttctgaattgcttcgtatcatttctgatcccccacaa ggaagtgagaatcttctcacgttgattctacagacattgactcaagaaacaacaccttct gatgagctgatagctactattaaacatttatatgaaactaaattgaaggatgtcacaatt cttgttccattgctggcttcactttccaaaagcgaggttttacctattttccctcgtctt gtcgcccttccattggataagttccagatggcacttgctcacgtactacagggttcagct cattcgggcccagctttaacacctgtagaagtgttggttgctatccatggtattgttcct gagaaagatggtcttccacttaagaagataatggatgtttgttccgcttgtttcgagcaa cgtacagtttttacacagcaggtcctggcaaaggccttgaaccagatggctgatcaaact cctttgcctctactcttcatgaggactgtaattcaggcaatcgatgcttttcctaagctg gttgattttgttatgaagatactttctaaacttgtggctagacaggtgtggcgtatgcca aagttgtgggttggtttcttaaaatgtgtatctcaaacgcagccccattcctttcatgta ttattacagttgccacctccacaactagaaagtgctctcaacaaacacgctaaactcaga gctcctcttgctgcttatgccaaccagccaagtataaaatcctcactgcctagatcaact ctagcagttattggccttgcaaatgaagcacatatgcagccaccgcatatgtcatcttcc tttgccctgtcagacacgagttcctcagttcatggagcaactttgacgtga

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