Quillaja saponaria (soapbark tree): O6P43_019746
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Entry
O6P43_019746 CDS
T09778
Name
(GenBank) putative General transcription factor IIH subunit
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
qsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_019746
09124 Replication and repair
03420 Nucleotide excision repair
O6P43_019746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_019746
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_019746
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
O6P43_019746
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
O6P43_019746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-ProteinID:
KAJ7959126
UniProt:
A0AAD7PKM6
LinkDB
All DBs
Position
8
Genome browser
AA seq
296 aa
AA seq
DB search
MASAPSKLYTDDVSLLVVLMDTNPFFWSTFSLQFSDFLSHVLTFLNSILLLNQLNQVVVI
ATGRNSCGYIYDSSTTSDHGLETGTMPALSSNLLLKLEEFVDKDEQLGKVDSEGAIASSL
LSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAIMNAIFSAQRSMVPIDSC
YVGSNNSAFLQQASYITGGVYYKPPQLDGIFQYFSTIFATDLHSRTFLRLPKSVGVDFRA
SCFCHKQTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQAQADVLSAANRKRKTLDT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctccttcaaagctctatacagatgatgttagccttctggttgtattaatg
gacacaaaccctttcttttggagcacattttctcttcaattttccgactttctttctcat
gtacttacttttctgaattcaatcttactcctcaatcaactcaaccaagttgttgttatt
gccaccgggcgcaattcatgtggctatatctatgattcgtctacaaccagtgaccatggt
ttggaaactggaacaatgcctgcgctttcttccaatttgttgctgaaattggaggaattt
gttgacaaggatgagcagttgggaaaggtggactcagaaggagctattgcatcttcactg
ttatcgggctcattgtccatggctctttgttacatacagagggtttttcgctcgggacca
ctccatccacaacctaggatattatgtctacatggatccccagatggaccagaacagtat
gtagcaattatgaatgcgattttctctgcacagaggtctatggttccaatagattcttgt
tatgtaggttctaacaattctgcattcctccagcaggcttcatacataacaggtggcgta
tattacaagcccccgcaactggatgggattttccaatatttctcaacaatctttgctact
gatttgcattctcgtacatttttgcggcttcctaaatcggttggtgtggattttcgtgca
tcgtgcttttgccataaacagacaatagacatgggctatatatgttctgtttgcttgtcg
atattctgtgagcatcacaaaaaatgttcaacctgtgggtctgtatttggtcaggctcag
gcagatgttctctctgcagccaaccggaaaaggaagactttagatacatga
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