Quillaja saponaria (soapbark tree): O6P43_019775
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Entry
O6P43_019775 CDS
T09778
Name
(GenBank) Proteasome subunit beta
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O6P43_019775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_019775
Enzymes [BR:
qsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
O6P43_019775
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O6P43_019775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
OGG_N
HhH-GPD
RecR_HhH
HHH
Kre28
HHH_8
INI1_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
KAJ7959160
UniProt:
A0AAD7PLK5
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All DBs
Position
8
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AA seq
634 aa
AA seq
DB search
MQLHSLLPFQTMKRPRASRAPSLSKSIPLPPPSTPPTPQTRQETLRSKTTISTSYSSRKP
KAILRPLKTSVQAQHVPLKWVPLNLGQGELSLQLTFPTGQSFRWKKTGPLQYTGVVGSHL
ISLKQLQEGEVFYCIHHTISEGNAREELLDFLNAGVSLADIWKVFSDSDARFAELSRHLG
GVRVLRQDPLECLIQFLCSSNNNIKRITKMVDYISSLGNYLGTVEGFQFHTFPSLKQLSL
ISEEELRKAGFGYRAKYITGTVISLQAKPGGGAEWLESLRKLDLQEVIDALCTLPGVGPK
VAACIALFSLDQHDAIPVDTHVWKIATRYLLPELAGSRSTPKLCTHVAEAFVSRYGKYAG
WAQTLLFIAELPPQKSLLPSHIWTIGEHKLAMEDGGEAEAVSPSNSLKSEINQRKEEEEE
NQNLKHKSATMSIFEYNGSALVAMVGKNCLAIGSDRRLGVQLQTIATDFQRIFKIHDKLF
IGLSGLGTDAQTLYQRLVFRHKLYQLREERDMKPESFASLVSAILYEKRFGPYFCQPVIA
GLGDEDKPFICTMDSIGAKELAKDFVVAGSASESLYGACESMFKPDMEAEELFETISQAL
LSSVDRDCLSGWGGHVYVVTRTEVKERILKGRMD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcacagtttgctgcccttccaaacaatgaagagaccaagagcgagccgagca
ccatcactttccaaatccataccgctgccacctccatcaacgcctccaaccccacaaacc
cgccaggaaaccctccgctcgaagactactatctccacctcttattcctccagaaaacca
aaagccattctcagacccctcaaaacatctgtccaggcccagcacgtccctctcaaatgg
gtacctctcaatcttggacaaggagagctctccttgcaacttactttccctactggtcaa
tcattcagatggaaaaagactggccctcttcagtacacaggcgttgttgggtctcaccta
atatcgctcaagcaacttcaggaaggggaagttttttactgcattcaccacacgatatcc
gaaggcaatgctagggaggaattacttgattttctcaatgcgggtgtttctcttgctgat
atttggaaggtgttttcggattcagatgcaaggtttgccgagttgtcgcgccatttggga
ggtgtccgggtacttaggcaagacccacttgagtgtctgattcagtttttatgttcgtct
aataacaatatcaaaagaattaccaaaatggttgattacatatcatctttgggaaattat
ttggggactgttgaaggttttcaatttcatacattcccgtccttgaagcagttgtctttg
atatcagaagaggagcttaggaaggctggttttggctacagggccaaatacataactggc
acagtaatttctttgcaagccaaacctggtggaggtgcagaatggcttgagtctcttcgt
aagttggatcttcaagaggttatagatgctctttgtacgttacctggagtgggtcctaag
gtggctgcatgcatagctctgttctctcttgatcaacatgatgctattcctgttgacaca
catgtgtggaagattgctacgaggtatctcctacccgagcttgcaggttctcgttcgaca
ccaaaactctgtactcatgttgccgaggcatttgttagcagatatggtaaatatgctggc
tgggctcaaactcttcttttcattgccgaattacctccacaaaaatcccttctaccttca
catatatggaccattggagaacacaaacttgctatggaagatggtggtgaagcagaggct
gtttcaccctccaactctctgaaaagtgaaattaatcagagaaaggaagaagaagaagaa
aaccaaaacctaaagcacaaatctgcgacgatgtcgatcttcgagtacaatggaagtgcc
ctagtcgctatggtgggtaagaactgcttggcgattggcagtgatcggagactcggagtt
cagctccagacaatcgctactgatttccagaggattttcaagattcacgataagctattc
attggtctctcaggccttggcactgatgctcagactctgtaccaacggcttgtgttccgg
cacaaactataccagctacgggaagagagggatatgaagcctgagtcgtttgccagccta
gtctctgcaattctatacgagaaaaggtttgggccatacttctgccaacctgtaattgct
ggcttgggagacgaagacaagccattcatttgtacaatggattcaattggggcaaaggaa
cttgcaaaagattttgttgttgctggcagtgcatcagagtcactttatggtgcttgtgag
tcgatgtttaagcctgacatggaagcagaggaattatttgagaccatctctcaagctttg
ctctcatccgtggatcgtgactgcctaagtggctggggagggcatgtctatgttgttacg
cgaactgaggtaaaggaaaggatcttgaagggaaggatggactga
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