Quillaja saponaria (soapbark tree): O6P43_020155
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Entry
O6P43_020155 CDS
T09778
Name
(GenBank) RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_020155
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_020155
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_020155
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
GvpG
Motif
Other DBs
NCBI-ProteinID:
KAJ7959598
LinkDB
All DBs
Position
8
Genome browser
AA seq
587 aa
AA seq
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MDSELPNEALTTTRFSDLQPPLSEPVIEALSEAGFEFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVVPLVEILRRSHAHPKPHQVLGIIISPTRELSSQIYNVSQPFISTLSNVKS
VLLVGGVEVHGDVRKIEEDGANLLIGTPGRLHDIMERMDVLDFRNLEILILDEADRLLDM
GFQKQITSIISLLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAETKQINDPAASE
QLASSKTPSGLNIEYLECEADKKPSQLVDLLIKNHSKKIIVYFMTCASVDYFGIVLPRLS
VLRGFPLIPLHGKMKQTAREKALATFTSLSSGVLLCTDVAARGLDIPGVDCIIQYDPPQD
PNVFVHRVGRTARMGKQGHAIVFLLPKEESYVEFLRIRRVPLEERKFSDDASDVVPQIRS
AAKKDRDVMEKGLRAFVSYVRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPAMPEVKNH
SLSTEGFIPIEDINFEEVKYRDKSREKQRKKNLKAKKEAKEKEVKPKSSKTLHPANVIRK
KTAKQRRARQTVEDEDELTREYRLLKKLKKGAIDESEFDKLTGTDEL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggactcggagttacctaatgaagcgttaacgaccacgcgcttctctgatctgcagcct
ccactttccgaaccggttatcgaagctctatccgaagctggattcgagttctgcacacca
gttcaagctgccacgattcctttactatgcagcttcaaggacgttgccgtcgatgccgcc
actggttcaggcaaaactctggccttcgttgtcccgctcgtcgagattttacgcaggtca
catgctcatcctaaaccccaccaggtactgggtataattatatcccccacgagggagtta
tcatcacaaatatataatgtttcacaacctttcatttcaacgctatcaaatgtgaagtct
gtgctccttgttggaggagtagaagtgcatggagatgtgaggaaaatagaagaagatgga
gcaaatttactcattggcacacctgggcggctacatgacataatggaacggatggatgtc
ctggattttcggaaccttgagattttgatattagacgaggccgatagacttttggacatg
ggatttcagaagcagattacttccattatttctcttttaccgaagcttcgtagaactggt
cttttctcagctacccaaactgaggctgttgaagagctttctaaagcaggattgagaaat
cctgtgagagtcgaagttcgtgcagaaacaaaacagataaatgatccagcagcatcagaa
caactggcctcctcaaagacgccgtcaggccttaacattgagtacttggaatgcgaggct
gataagaaaccatcacagcttgttgatctactcattaagaaccactcgaaaaaaataata
gtatatttcatgacttgtgcttctgttgactattttggaattgttcttcctcgtctttct
gttttgaggggtttcccattgatcccacttcatggaaagatgaagcagactgccagggag
aaagcattagctacgtttacatctctttctagtggagtacttctatgtactgatgttgca
gcacgtggacttgacatacctggtgttgattgcataatacagtatgatccgcctcaagat
ccaaatgttttcgtgcacagagttggccgaactgctcgaatgggtaaacaaggacatgca
attgttttcttattaccaaaggaggaatcttatgtagaattcctgcgtataagaagggtt
ccgcttgaagagaggaaattctctgatgatgcatctgatgttgttcctcagattcggtct
gctgcaaaaaaggatcgtgatgtcatggagaaaggactcagggcatttgtttcatatgtt
cgtgcatataaggaacaccattgctcttacatttttaggtggaaagaacttgaaattggc
aagttggccatgggatatggcctcctgcaacttcctgcaatgcctgaagtaaaaaaccac
tcactttccactgagggtttcattcctatcgaagatattaattttgaagaggtcaagtac
agggataaatctcgagagaaacaaaggaagaagaacctgaaagcaaagaaagaagcaaag
gaaaaagaagtaaaacctaagtccagcaaaaccctacatcctgctaatgtcataaggaag
aaaacagccaaacagagacgtgcgcggcagacagttgaagatgaagatgaattgacacgg
gaataccgtctactgaaaaaactgaaaaagggggctatagatgaaagtgaatttgataag
ttaactggtactgatgagttatga
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