Quillaja saponaria (soapbark tree): O6P43_020458
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Entry
O6P43_020458 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_020458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_020458
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_020458
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_020458
Spliceosome [BR:
qsa03041
]
Complex A
U1 snRNP components
U1 related factors
O6P43_020458
Complex B
O6P43_020458
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_020458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
DUF4436
Motif
Other DBs
NCBI-ProteinID:
KAJ7959946
UniProt:
A0AAD7LKP0
LinkDB
All DBs
Position
8
Genome browser
AA seq
565 aa
AA seq
DB search
MSYVPPHLRNSSSTAVATRTESRSSSLNDDPTKLSVPSNSHFKNSSTTTSYTTFSNGSRR
SNGTLPPARVLTVPDPVFPQWKPSERVSRITPEQIEEVRLRLNVDVTVAPDSLPAPAPIE
SFTDMCLHTSIMKDIAFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ
HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIAEQRSE
LRAGVDVVVATPGRFIDHLQQGNTFLSRISFVVLDEADRMLDMGFEPQIREVMRNLPEKH
QTLLFSATMPVEIESLAQEYLTSPVQVKVGKVSSPTANVSQNLVKISESEKIDRLLGLLV
EEATHAERCGHPFPLTIVFVERKTRCDEVSEALVAQGLCAVSLHGGRSQSEREAALRDFR
NGSTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGTSGQATSFYTDR
DMFLVAHIKRAISDVESGNTVEFATGKVARRKEREAAAAQKEAKTALSTLSAGGPAPINI
EDKYRFMITVSNTKKEGAADSAWDD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccacacctcaggaactcgagttcaacggctgttgctaccagaacc
gaatctagaagctcatctctaaacgatgatccgaccaagctttcggttccttcaaactct
cactttaagaactcttccactactacttcttacaccaccttttccaatggctctcgccgg
agcaatggaacccttcctccggcgagagttctcacggtccctgaccctgttttcccgcag
tggaagccctctgaacgcgtttcacgtataacgcctgagcagattgaagaggttcgactg
cggcttaatgttgatgtcactgttgcccctgactctcttccagcacctgcaccaattgaa
tcttttacagatatgtgtctgcacacgagcatcatgaaggatattgcatttcatgaatac
actaggccaacttctattcaggcacaggcaatgccagttgctctcagtggaagagatcta
ttgggttgcgcagaaactggtagtggaaaaactgctgcatttaccattcctatgatacag
cattgcttggctcaacctcctatccggcgtggtgatggccctctggctttggttttggct
cctaccagagagcttgctcaacaaatagaaaaagaggtgaaagctttcagtagatctctt
gagtcatttaaaactgccataattgtgggtgggacaaacattgctgagcagaggtcagag
ctacgagcaggagttgatgtagtggttgctactcctgggagattcattgatcatttgcag
caggggaacactttcctttctagaatatcatttgttgttctagacgaggctgataggatg
cttgatatgggttttgaaccacaaataagagaggtgatgaggaaccttcccgaaaagcat
caaactttactatttagtgcaactatgcctgtggaaattgaatcattagcacaggagtac
ctaactagccccgtgcaagtgaaggtgggaaaagtgagtagcccaacagcaaatgtttct
caaaatctggtgaagatttctgaaagtgagaagattgatcggcttctaggtttgcttgta
gaggaggcaacacatgctgaaagatgtggtcatccctttccattaactattgtgtttgtg
gaaaggaagacaaggtgcgatgaagtctctgaagcattggtagcacaaggtttatgtgca
gtttcgcttcatggtggccgtagtcagagtgaaagagaggctgctctgcgtgattttcgg
aatggctccactaacattttggttgccactgatgttgcctcacgtggcttagatgtaaca
ggagtatctcacgttataaatctagatcttccaaagaccatggaagattatgtgcaccgg
attggaaggacggggcgtgcaggaacatcaggccaagccacttcattttacactgaccgt
gacatgttccttgtggcacatattaagagagcaatatcagatgtggaatcaggaaacacc
gtggaatttgccactgggaaggttgccagaaggaaggagagagaagcagctgcggcacaa
aaagaagcaaagactgctttgtctacactctcagcaggtggaccggctccaataaacatt
gaggataaatataggttcatgattaccgtatcaaacactaaaaaagagggtgcagcagat
agtgcttgggatgattaa
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