KEGG   Quillaja saponaria (soapbark tree): O6P43_020583
Entry
O6P43_020583      CDS       T09778                                 
Name
(GenBank) THO complex subunit 4C
  KO
K12881  THO complex subunit 4
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03013  Nucleocytoplasmic transport
qsa03015  mRNA surveillance pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_020583
  09122 Translation
   03013 Nucleocytoplasmic transport
    O6P43_020583
   03015 mRNA surveillance pathway
    O6P43_020583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_020583
   03041 Spliceosome [BR:qsa03041]
    O6P43_020583
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     O6P43_020583
    TREX complex
     O6P43_020583
Spliceosome [BR:qsa03041]
 Complex C
  Other components
   EJC/TREX
    O6P43_020583
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    O6P43_020583
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-ProteinID: KAJ7960091
UniProt: A0AAD7LMK1
LinkDB
Position
8
AA seq 296 aa
MASSLDVSLDDRIKNRSNRERGRGRGRAHRGRVPGVAFSVGRMSGAARRGPLTVNARPSS
YVIAKSIHRTRSFPWQHDLFEDGLRAAGIQGVEVGTKLYVSNLDYGVTNEDIRELFAEIG
DLKRYSVHYDKNGHPNGSAEVVYTRRSDAFAALKKYNDVLLDGRPMKIEIVGYNAELPVS
ARVNVSGVNGRKKRTLIMTPGPAQTGGPAVANRGPGWIRRGTRRNGSDRGTRRSGSDLGP
TRNGSGRGQGQGRGRAIGGGGRGRGHSRGKKEPVEKSANELDKELETYHAEAMNIS
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcttcttcgttggacgtctcacttgatgatagaattaagaaccggagtaacagagag
agaggtagaggacgtggtagagcccaccgtggccgtgtaccaggtgtggcttttagtgtt
ggaagaatgtctggtgcagcacgtagaggtcctcttacagtgaatgctcggccatcatct
tatgtcattgccaagtctatccacagaaccaggagttttccatggcagcatgatttgttt
gaggatggccttagagctgcagggatacaaggcgtagaagttggtacaaaattgtatgta
tccaacttggactatggagtgaccaatgaagacatacgggaactttttgcggagattgga
gacttgaagcgttactcagtccattatgacaaaaatggtcacccaaatggatcagctgaa
gttgtgtacaccagaagaagtgatgcctttgcagctcttaagaagtacaacgatgtactt
ctggatggaaggcccatgaagattgaaattgtgggttacaatgcagagttgcctgtttct
gctcgtgttaatgtgtctggggtaaatggacggaagaagagaacactcataatgacgcct
ggaccagctcagactggaggccctgctgtggctaatcgtggtcctggatggatccgtcgt
gggactagaaggaatgggagcgatcgtgggactagaaggagtgggagcgatcttgggcct
acaaggaatgggagcggtcgtggtcaaggccaaggccgtggtcgtgctataggaggagga
ggtcgcggacgaggacatagtcgtggaaagaaggaacctgttgaaaagtcggcaaatgaa
cttgacaaggaactggagacttaccatgctgaagccatgaacatttcatga

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