Quillaja saponaria (soapbark tree): O6P43_020787
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Entry
O6P43_020787 CDS
T09778
Name
(GenBank) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa04120
Ubiquitin mediated proteolysis
qsa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
O6P43_020787
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
O6P43_020787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsa04121
]
O6P43_020787
Enzymes [BR:
qsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
O6P43_020787
Ubiquitin system [BR:
qsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
O6P43_020787
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
O6P43_020787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
zf-C3HC4_2
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
Beta-prop_EML
Beta-prop_TEP1_C
WD40_RFWD3
WD40_like
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
zf-C3HC4_4
Beta-prop_DCAF12
Beta-prop_SCAP
U-box
DUF1664
zf-RING_5
YpoC
Beta-prop_IFT122_2nd
zf-Nse
YbfN
zf-RING_10
zf-rbx1
Motif
Other DBs
NCBI-ProteinID:
KAJ7960327
UniProt:
A0AAD7PM75
LinkDB
All DBs
Position
8
Genome browser
AA seq
681 aa
AA seq
DB search
MDEVSVGPLVPAVKSDAAKPSTVTGPQDPYVAAVSEHTSPAEAAEAGISELDKDFLCPIC
MQIIKDAFLTACGHSFCYMCIITHLRNKNDCPCCGHYLTNNQLFPNFLLDKLLKKTSACQ
ISKTASPVEHFRQSLQQGCEVSIKELDTLLTLLAEKKRKMEQEEAERNMQILLDFLHCLR
KQKVEELKEVQTDLQFIKEDVNAVERHRMELYHARDRYSLKLRMVDDSSGRKAWPSAMDK
NSSGLISNSLNMRGGLSSGSIPNKRVDGTSQGSSHGIQRKDAISGSDSQYINHSGLALVR
KKRVHAQFNDLQECYLQKRRQLADKPLIEQERDKNVIKREGYSAGLADFQSVLTTFTRYS
RLRVIAELRHGDLFHSANIVSSIEFDRDDEWFATAGVSRRIKVFDFSSVVNDPADVHCPV
MEMSTRSKLSCLSWNKFAKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRT
EPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYD
LRNISRPLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENLPVRTFRGHTNEKN
FVGLTVNSEYIACGSETNDVFVYHKEISKPVTWHRFGSPDVDEAEEDAGSYFISAVCWKS
DSPTVLTANSQGTIKVLVLAA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtatcagtgggccctctcgtccctgcggtgaaatccgatgctgcaaaaccc
tcaactgtcaccggtcctcaagatccctatgtcgccgccgtctccgaacatacttctccg
gcggaggcggcagaagctggaatatctgaactggacaaggacttcttatgcccgatttgt
atgcagattatcaaggacgctttcctcactgcttgtggtcatagtttctgctacatgtgc
attatcactcacctccgcaacaaaaatgattgcccttgctgcggccattacctcaccaac
aaccagttatttcctaatttcttgcttgacaagctattgaagaagacttcagcttgtcaa
atatcaaaaactgcttctcctgtggaacatttccggcagtcattacagcagggttgtgaa
gtgagtattaaggagcttgacacccttttgacactccttgctgagaagaagagaaaaatg
gaacaagaagaagctgaaagaaatatgcaaatactgctggacttcttgcattgcttaagg
aagcaaaaggttgaggagctaaaggaggtgcaaactgacctccagttcataaaagaagac
gtaaatgcagtagagagacatagaatggagttatatcatgcaagggacaggtactctttg
aaactgcgaatggttgatgattcaagtggaagaaaagcatggccttcggctatggataag
aacagtagtggccttatctccaactctcttaatatgcgaggagggttgtcttcagggagt
attcctaataagagagttgatggaacatcccaaggaagctctcatggaattcaaagaaaa
gatgctattagtggatcagactcacaatacataaatcattctggtctggctttagttaga
aaaaaaagggttcatgcacagttcaatgacttgcaagaatgttacctgcaaaagcgacga
caattggcagacaagcccctcattgaacaagaaagagataaaaatgtcataaaaagagag
ggctatagtgctggtcttgcagattttcaatctgtattgacaacattcacacgatacagt
cgactgagagtaattgctgaactcaggcatggggacctatttcattcagccaatatagta
tcaagcattgagtttgaccgtgatgatgagtggtttgctactgctggagtttccaggcgt
ataaaagtttttgacttctcctctgttgtgaatgaccctgcagatgtgcactgtcctgtc
atggagatgtcaacgcgctcaaaacttagttgcttaagttggaacaaatttgctaagaac
cacatagctagtagtgattatgaaggaattgttactgtttgggatgtaactactcgtcag
agtttaatggaatatgaagagcatgagaaaagggcatggagtgttgatttttcaagaaca
gagccctctatgcttgtatctggtagtgatgattgtaaggtcaaagtttggtgcacaaag
caggaggcaagtgtgcttaacattgatatgaaagctaacatatgttgtgtcaagtataat
cctggatctggcaattacattgcggttggttcagcggaccatcacattcattattatgat
ttgagaaatatcagccgtccgctccatgtcttcagtgggcacaggaaagctgtttcatat
gtgaaatttttgtctaacaatgaacttgcatctgcatctacagatagtactctacggtta
tgggatgtgaaggaaaacttaccagttcgtacttttagaggccacacaaatgagaaaaac
tttgtaggtctcacagtaaatagtgaatacattgcatgtggcagtgaaacaaatgatgtt
tttgtctaccacaaggaaatttccaagcctgtgacttggcatagattcggttcccctgac
gtggatgaggcggaagaagatgcaggatcttacttcataagcgctgtatgctggaagagt
gatagcccaactgtactaactgccaacagtcagggcacaatcaaagtgctagtacttgca
gcttaa
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