KEGG   Quillaja saponaria (soapbark tree): O6P43_020878
Entry
O6P43_020878      CDS       T09778                                 
Name
(GenBank) RNA-binding protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_020878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_020878
   03041 Spliceosome [BR:qsa03041]
    O6P43_020878
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     O6P43_020878
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     O6P43_020878
Spliceosome [BR:qsa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    O6P43_020878
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 DUF3292 Piezo_TM1-24
Other DBs
NCBI-ProteinID: KAJ7960437
UniProt: A0AAD7LM57
LinkDB
Position
8
AA seq 457 aa
MVKKRKSFTKEEPKPPELPLPPPPPQETDPESDPEEEDQEEFGEEEEAEAQDSSSSEEEE
DDEDSKRETVKKLLEPFGKDQLINIIKEAAITNPSIAAEIIKSAESDPVHRKIFVHGLSW
DITNDSLTSAFKQYGTVEECNVVTDKITGRSKGYGFVLFKTRAGARKSLKQPQKQIGSRM
AACQLAAAGTVLTQPSSEPNGRKLFIANVGAQVSIDKLREFFTRYGEIEDGPSGFDKATG
KFKGFAIIVFKTTEGIKKALEEPVKMFEGCKLQCSIWVQGRNAKNNTTGQVVVGSGASAT
GNVASYAGAAFAPNNVALQPLPVGLNPGLIGQNFNPGGILMGQIPAIGVMNPVFGIGAGT
NMNQVGVSPSFASGISQPLNLVGSSAPMGLNGGFGMQPVINSMSPSVIGSYGSNAALQGL
VAYPGSQLGQSSASGIAAVRPHTGAGSTGTLPPYFAR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggtgaagaagcgtaaatcatttacgaaagaggaaccaaaacctccagagctaccacta
ccaccaccaccaccgcaggaaactgatccagaatccgatcccgaggaagaagaccaagaa
gaatttggagaagaagaagaagctgaagcacaagactcttcctcttccgaagaagaagaa
gacgacgaggattcaaagcgagaaactgtgaagaagcttttggagccctttggcaaagac
caactcataaacattattaaagaagctgcaattaccaatccttctattgcagctgaaata
attaaatccgctgagtctgaccctgtccaccgtaagatttttgttcatgggctgagttgg
gatatcacaaacgacagccttacctcagcgttcaagcagtacggtaccgtcgaggagtgc
aatgtcgtcaccgataagatcactggtcggtctaaaggctatggttttgttctctttaag
acccgtgctggtgcccgaaagtcattgaagcaaccccagaagcaaattgggagtagaatg
gctgcgtgccaacttgccgcagctgggacggtgttgacccagccatcttccgagcccaat
ggacgcaaactatttatagccaatgttggtgcacaggttagtatagataagcttagggaa
ttctttactaggtatggggagattgaagatgggccatctgggtttgataaagcaacagga
aagtttaaaggatttgccattattgtttttaaaacaacggagggaataaagaaggcatta
gaagagcctgttaagatgtttgaaggttgcaaattgcaatgctccatttgggtgcaaggg
cgcaatgctaagaataatactacaggacaggtagtggttgggtctggagcaagtgccact
ggtaatgttgccagttatgctggtgccgcatttgctcctaataatgttgctctccaacct
ttgcctgttggtttgaatccaggattaattggtcaaaatttcaatccaggtgggattctg
atgggccagattcctgctataggagttatgaatcccgtatttggaattggggctggaaca
aatatgaatcaggtgggagtgtcaccatcttttgcttctggcatatcgcagcctttaaat
ctggttggaagcagtgctcctatgggattgaatgggggatttggcatgcaacctgttatc
aatagtatgagcccaagtgtaattggtagttatggttctaatgctgctttgcaaggatta
gttgcttatccaggttcccaattaggccagtcctcagcatcagggatagcggctgtgagg
cctcatactggtgctggttctactggaacattgccaccatattttgcgcgctag

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