Quillaja saponaria (soapbark tree): O6P43_021003
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Entry
O6P43_021003 CDS
T09778
Name
(GenBank) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_021003
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_021003
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
O6P43_021003
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
O6P43_021003
SLIK complex
O6P43_021003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
KAJ7960580
UniProt:
A0AAD7LPG0
LinkDB
All DBs
Position
8
Genome browser
AA seq
1722 aa
AA seq
DB search
MAFFRNYSNETVSHSVLEDKVQAQNVDRTHRSVGNDDIDAVSCEKEFDMNIDVQYQSYVE
PDNGSRLQNEPTVEDGISMGEPNLQPTGRRTAMAATWGSNFWKDCQPMCPQNGSDSGQEV
KSGSDHKNAEESDDNSFDKREVGLDSEDDDGQNGVGKGPTGHSDVPAEEMLSDEYYEQDG
EEKSDSFHSRRNHQPVRSKSWPQRTHAGVSNHLHRNSGVLIDAEDDGDGDGDGDDYDNNN
GDGDADYEEDDEADEDDPDDADFEPATSGRTANKDKDWAGEDSEEDVDSDDDLDVLDEDD
SYDEKKPKGRQQGKVGRNKKSTREHRSSNPCSQQRRVRSSVEEDESSAEDSDIESDEDFR
SMRRRGALVHRNNLQSSVSANLSGRNSEVRSSSRSTRKVSYAESEESEEADEGKKKKSQK
DEIEEEDGDSIEKVLWHQPKGMAEEAQRNNRSTEPVLLSHVFETESDWNEMEFLIKWKGQ
SHLHCQWKSFSELQNLSGFKKIEVNDVSKEMDLDLIKQNCQVERIFADRISKDSSGNVFP
EYLVKWQGLSYAEATWEKDIDVAFAQLFIDEYKAREAEIAVQGKMVDLQRKKSRESLRKL
DEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQI
HGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQHEFYNDKKVGRPVKFN
TLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ
NSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEIELANLHMELRPHILRRVIKDVEK
SLPPKIERILRVEMSPLQKQYYKWILERNFNDLNKGVRGNQVSLLNIVVELKKCCNHPFL
FESADYGYGGDSGSNDSSKMERIVLSSGKLVILDKLLLRLHETKHRVLIFSQMVRMLDIL
AEYMSLRGFQFQRLDGSTKAELRQQAMDHFNVPGSDDFCFLLSTRAGGLGINLATADTVI
IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEENILERAKKKMVLDHLVIQKL
NAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDRNDEESKKRLLSMDIDEILERAE
KVEEKEAEGEEGRELLSAFKVAIAQAEEALAPRAARNTKSYAEATPPDRSNKRKKKEYEH
QERVPKRRKAEVSVPAVPMMEGASVQVRSWSYGNLSKRDALRFSRAVMKFGNQSQINLIV
TEVGGAVETSPEEAQTELFDALIDGCREAVELGSLDPKGPLLDFFGVPVKVNDLLTRVQE
LQLLAKRISRYEDPVAQFRVLMYLKPSNWSKGCGWNQIDDARLLLGIYYHGFGNWEKIRL
DERLGLMKKIAPVELQHHETFLPRAPNLRDRANALLEMELAALGGKNANAKMGRKPSKKG
KENHMNISLSRGQEKKGKLGSAKVNAQKMKKDKPRRPQRVEPIVKEEGEMSDNEEVYEQF
KEVKWMEWCQDVMVEEIKTLKRLHRLQTTSDNLPKEKVLSKIRNYLQLLGQRIDQIVLEH
EDEPYKQDRMTMRLWKYVSTFSNLSGERLHQIYSKLKQEQEDEAGVGPSHLNYDPNYSIP
FPRHEKRLKGYKNELSEPVQNTGKFEAWKRRRRVESDIQFQVQPPSQIPMSNGTHLSDPS
ALGILGAGPSDRRFASEKPRTRSTGFPPRQGFSSASDIPFQM
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaggaattattcaaatgaaacagtttcacacagtgtattggaagataaa
gtccaggcacagaatgttgatagaacccacagatcagtaggtaatgatgacattgatgca
gtttcatgtgaaaaagaatttgatatgaacattgatgtgcagtaccagagttatgttgaa
ccagataatggcagtaggctgcaaaatgagccaacagttgaggatgggatcagtatggga
gaaccaaacttgcagcctaccggaaggagaacagctatggctgcaacatggggttcaaat
ttttggaaggattgccaacctatgtgccctcagaatgggtctgattctgggcaggaagtt
aaaagtggatctgaccataaaaatgcagaagaatctgacgataattcatttgacaaaagg
gaggttggattagattcagaagatgacgatggacaaaatggggtgggcaagggtccaaca
gggcattctgatgtccctgcagaggagatgttgtctgatgaatattatgagcaggatgga
gaagagaagagtgactcttttcacagtaggaggaaccatcaaccggttcggtcaaaatct
tggcctcaacgaactcatgctggtgttagtaaccacttgcataggaactctggggtttta
attgatgctgaagatgatggtgatggtgatggtgatggtgatgattatgacaataataat
ggcgatggtgatgcggattatgaagaggatgatgaggcagatgaagatgatcctgatgat
gcagactttgaacctgccacgagtggtcgcactgcaaacaaggataaagattgggcaggt
gaagattcagaggaagatgttgacagtgatgatgatctggatgtcttggatgaggatgat
tcttatgatgaaaaaaagcccaagggaaggcaacaaggtaaagttggtcgtaataaaaaa
tctactagggaacatagatcatctaacccatgcagtcaacaaagaagagtcagatcatcg
gttgaagaagatgagtcatcagcagaggattctgacattgaaagtgatgaggattttaga
agcatgagaaggcgaggtgcgctagtacacaggaataacttgcaatcttctgtgtcagca
aatttatctggacgaaacagtgaggttcgtagttctagtagatcaactaggaaagtatca
tatgctgaaagtgaagaaagtgaagaagctgatgaagggaagaagaaaaagtcccagaag
gatgaaattgaagaggaagacggtgactctattgaaaaggtattgtggcatcagccaaag
ggtatggctgaagaagctcaaagaaataatcgatctacagagcctgttctgttgagccac
gtgtttgaaactgaatctgattggaatgagatggaattcttgataaagtggaaaggccaa
tcacatttgcattgtcaatggaaatctttttccgagctgcaaaatctgagtggctttaag
aagattgaggtcaatgatgtgagcaaagaaatggatttagatcttatcaagcaaaactgt
caggtggagaggatatttgcggaccgtatcagtaaagatagttctggtaatgtgtttcca
gagtatttagtcaagtggcagggactatcttatgcagaggcaacatgggagaaggacata
gatgttgcatttgctcaactttttatcgacgaatataaggcccgtgaggctgaaattgca
gtgcaaggaaaaatggtggatcttcagcgcaagaagagcagagaaagtttgcgaaaactt
gatgaacagcctgaatggttgaagggtggaaagcttcgtgattatcagcttgagggtttg
aattttcttgttaacagttggagaaacgacacaaatgttattttagctgatgaaatgggc
ctcggtaagactgttcaatcagtatccatgcttggttttctacagaatgcgcagcaaatc
catggtccatttcttgtcgttgtcccattatccactttatcaaactgggccaaagaattt
aggaagtggcttcctgatatgaatgttattgtatatgtcggtacccgagctagtcgagag
gtttgtcaacagcatgaattttataatgacaagaaagttggcaggcctgtaaaattcaat
acactgttgactacatatgaagtagttctaaaggataaggctgtcctctcaaagatcaaa
tggaattatctgatggttgatgaagctcataggttaaagaatagtgaagcacagttgtac
acaacactttcagagtttagcactaagaacaagttgcttatcactggtactcccctacag
aacagtgtggaagagctatgggctttgcttcactttcttgatcctgacaagttcaagagt
aaggatgattttgttcaaaattacaagaatcttagttcatttaatgagattgagcttgct
aatcttcatatggaattgaggcctcacattctgcgaagagttatcaaagatgtggaaaaa
tctttgccccccaaaattgagcgtatccttagggttgagatgtcacctcttcagaaacag
tactataagtggattttggaacggaactttaatgatttgaacaaaggagttcgtggaaat
caggtttcacttctaaacattgttgtagagctaaagaaatgctgcaatcatcctttcctg
tttgaaagtgcagactatggttatgggggggactcaggaagtaatgatagcagtaaaatg
gagagaattgtcttaagcagtgggaagcttgtcatactcgataagttgcttcttagatta
catgagacgaaacatcgcgttctgattttctcacagatggttaggatgttggatatactt
gctgagtatatgtcacttagagggtttcaattccagaggcttgatggcagtacaaaggct
gagttgcgccagcaggcaatggatcatttcaatgtacctggcagtgatgatttctgtttc
cttctttcaacacgagcagggggtttggggattaaccttgctacagcagacacagttatt
atatttgactcagactggaatccccagaatgacctacaggcaatgagtagagctcatagg
attgggcaacaagaagttgtgaacatctatagattcgtcacaagcaaaagtgtggaggaa
aatatcttggaacgagccaaaaagaagatggtacttgatcatttggtgattcaaaaatta
aacgcagaaggtagattggagaagaaagaagccaaaaaagggagctattttgacaaaaat
gaattgtcagcgattttaagatttggagcagaggaactttttaaggaggacagaaatgat
gaagaaagcaagaaaagactcttaagtatggatattgatgagattcttgaaagagctgag
aaggttgaagagaaggaagctgaaggagaggaagggcgtgagttgttgagtgcttttaag
gttgctatagcccaagcagaagaagctcttgctcctcgtgctgcaaggaataccaaaagc
tatgcagaggccactcctcctgatagaagtaataagaggaaaaagaaagaatatgaacac
caggagagagtcccaaaacgccgcaaagcagaggtatcagttcctgcagtgccaatgatg
gagggagcatctgttcaagtgagaagttggtcttatgggaatttgtctaaaagggatgca
ctacgtttttctcgtgctgttatgaaatttgggaatcaaagccaaatcaacttaatagtc
accgaagttggtggtgctgttgaaacatccccagaagaagcacaaactgagctctttgat
gctctaattgatggttgtagagaagcagttgaacttggaagtttggacccaaagggacct
ttgctggatttttttggtgtccctgttaaggttaatgatctactcactcgtgttcaagaa
cttcaactcttagctaagcgcattagtcgttatgaagatcctgttgcacaattccgtgtt
ttgatgtatctcaaaccttcaaactggtccaaaggttgtggctggaatcaaattgatgat
gcaagattgcttctgggaatatattatcatggatttggcaattgggaaaaaataaggtta
gacgaaaggctaggccttatgaagaagattgcaccagtggaactccaacatcatgaaacc
tttctaccccgagctccaaatctgagagatcgtgctaatgcacttctggaaatggaatta
gcagctcttggaggaaagaatgcaaatgccaaaatgggtcgtaagccttccaagaagggg
aaggaaaatcacatgaacatttcattgtcgcgtggccaggagaagaaaggaaaattaggt
tctgcaaaggttaatgctcagaaaatgaagaaggacaaacctcggagacctcagagagtt
gaacccatagtgaaagaagaaggtgaaatgtcagacaatgaagaagtatatgagcaattt
aaggaggtgaaatggatggagtggtgtcaagatgtcatggttgaagaaattaaaaccttg
aaacgccttcacaggttgcagacgaccagtgacaatcttccaaaagaaaaggtgctttca
aaaattcgtaactatttacagcttcttggtcaaaggatagatcagatagtgttagaacat
gaggatgaaccctataaacaagataggatgaccatgcgattgtggaagtatgtctctacc
ttttcaaatctctctggggagagacttcatcaaatttattccaaacttaaacaagaacaa
gaagatgaagcaggggttggtccctcccatctcaattatgaccctaactattctatccct
ttccctcgccatgagaagaggctaaaagggtacaaaaatgaactgtcagaaccagttcag
aatacagggaaatttgaagcatggaaacgaaggagaagagttgaaagtgatattcagttc
caagttcagccaccttctcaaatacccatgagtaatggaacccacttatctgatccaagc
gcactggggattcttggggctggaccatctgatagacggtttgctagtgagaaacctcgg
acgcgttcaactggttttcctccgagacaaggtttctcttcagcttcagatattccattc
caaatgtga
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