Quillaja saponaria (soapbark tree): O6P43_021205
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Entry
O6P43_021205 CDS
T09778
Name
(GenBank) Cell differentiation, Rcd1-like protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_021205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_021205
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_021205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-ProteinID:
KAJ7960812
UniProt:
A0AAD7LMU8
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All DBs
Position
8
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AA seq
317 aa
AA seq
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MANLPQSLSMNAQFGGPSASLQNPAGALVNKDRKMASAEQLVLDISNPELREHALLELSK
NKELFQDLAPFVWNSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP
SSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFGSCLREDPTTRRWLQQLVHNVG
VNRVPALQAGGGFEHLM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcttccccaatcgctctccatgaatgcacagtttggaggaccaagtgcgtct
cttcaaaaccctgccggagctctggtgaacaaggatcgtaagatggcgtctgctgaacaa
ttggttctcgacatcagtaatcctgaacttcgagaacatgctctgcttgaactctcaaag
aataaggagctatttcaagatttggctcccttcgtgtggaattcttttggcactattgct
gccctcatacaggaaatagtttcaatatatcccgttctgtcacctccaaatcttactcca
gcacagtcaaatcgagtgtgcaatgctcttgctcttctccagtgtgtagcatctcacccg
gacacaaggatgctatttctcaatgctcatatacctttatatctataccctttccttaac
accacaagcaagtcaaggccatttgagtacttaaggcttaccagtttaggtgtcattggt
gccctggtgaaggttgatgatacagaagttattagtttcctcctatcgacagagataatt
ccactctgcctacgaactatggaaatgggcagtgaattgtcaaaaacagttgctacattc
atagtccaaaaaattctgttggatgatgtgggcttggattatatttgtaccacagcagaa
cgattttttgcagtcggtcgggtactgggaaacatggtcgcagctcttgctgagcagccc
tcatctcgtctcttgaaacatattatccgatgctatctccgactgtcagataatccaagg
gcttgtgatgcattaagaagttgtctcccggacatgctaagagatgctactttcggtagt
tgtcttcgtgaagatccaacaactaggaggtggctgcagcagttggttcacaatgtggga
gtaaatcgggttcctgcacttcaggctggaggaggatttgaacatttgatgtga
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