Quillaja saponaria (soapbark tree): O6P43_021232
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Entry
O6P43_021232 CDS
T09778
Name
(GenBank) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_021232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_021232
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_021232
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
O6P43_021232
Coactivators
SAGA/TFTC/STAGA complex
O6P43_021232
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
O6P43_021232
STAGA complex
O6P43_021232
TFTC complex
O6P43_021232
SAGA complex
O6P43_021232
SLIK complex
O6P43_021232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-ProteinID:
KAJ7960844
UniProt:
A0AAD7LMF9
LinkDB
All DBs
Position
8
Genome browser
AA seq
535 aa
AA seq
DB search
MSIVPKETIEVIAQSIAITNLSPDVALALAPDIEYRVREIMQEAVKCMRHSKRTILTADD
VDSALKLRNVEPVYGFTSKDPLRFKRAAGHRDLFYIDDKDVEFKEVLESQLPKAPLDASV
STHWLAIEGIQPAIPENAPAEAPSESRRSEYKEDGLPVDIKLPIKHALSRELQLYFDKIT
ELARNKSASVLFKEALVSLATDSGLHPLVPYFTYFIADEVSRNLKSFHLLFALMRIVRSL
LRNPHVHIEPYLHQLMPSVITCLVAKRLGSRLSDNHWELRNFTANLVALICKRFGHVYHN
LQPRVIKTLLHAFLDPTKALPQHYGAVQGLAALGPNVVQLLILPNLEPYMHLLKAEMHLE
KQKNEMKRHEAWQVYGALLCAAGQCMHEKLKMFRSLLSPPTSAIWKSNGKVMASMPNKRK
ASMDNIMQQPPLKKLATDGAVGMMPMNSMPGDLPGTIGGFSSGMGSSSVSISSMPQQLSN
MPGRGVGGGVVNASAILAQAWKEDMDTGHLLASMFELFGERVFSFTPKPELSIFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgtaccgaaggagaccattgaagtcattgcacagagcattgccattacaaat
ttgtccccagatgtcgctcttgctcttgctcctgatattgagtaccgtgttcgggagatc
atgcaggaggctgttaaatgcatgcgccactcgaagcgaactattctaacagctgacgac
gtggatagtgcacttaaattaagaaatgtggagcctgtatatggtttcacctctaaagat
cctctgcggtttaaaagagcagctggacatagggatttgttctacattgatgacaaggat
gtggaatttaaagaagtgcttgaatcacagttaccaaaagcaccacttgatgcatcagtt
agcactcactggctggcaattgaaggtattcaacctgcaattcctgaaaatgctccagct
gaagctccttcagagagcagaagatctgaatacaaggaagatgggcttcctgtggatatt
aaattacctattaagcacgcactgtcaagggagcttcagctttattttgacaaaataact
gagctggcaaggaacaaatctgcatctgtactctttaaagaagcattagttagcttggca
acagactcgggactccatcctttagttccttatttcacatacttcatagccgatgaggtt
tcacgcaatctgaaaagtttccaccttttattcgctttgatgcgcattgttcgaagcctt
cttcgaaatccacatgtacatatagaaccttatctacaccaattgatgccgtctgttatt
acctgccttgtggcgaaaagattgggaagtagactgtctgacaatcactgggagcttaga
aatttcacggccaacctggttgctttgatatgcaaaagatttggacatgtttaccacaat
ctccagccacgtgtcataaagactttgctccatgctttcctcgatccaacaaaagctttg
ccacaacattatggtgcagttcaagggctagcagctcttggacccaatgtggttcaactg
ctcattcttccaaatcttgaaccatatatgcatctccttaaagcagagatgcaccttgag
aagcaaaaaaatgagatgaagaggcatgaagcatggcaagtttatggggctttgctgtgt
gcagctggccaatgtatgcatgaaaagcttaaaatgttccgcagtttgctttctcctcca
actagtgctatttggaaaagcaatggaaaagtcatggcctcaatgccaaacaaacgcaaa
gcaagcatggacaacattatgcagcaaccaccactgaagaaactagctacagatggggct
gtcggtatgatgccaatgaactctatgccaggtgaccttccaggtacaattggtggattt
tcctcgggtatgggtagttccagtgtttccatatcgtcgatgccacaacaattatcaaac
atgccaggaagaggggttggtggtggagtggtaaacgcatctgccattcttgctcaagcc
tggaaggaggacatggatacagggcatctgctggcatcgatgtttgaactttttggtgaa
cgtgttttctccttcactcccaaacctgaattatctatattcttgtaa
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